Factsheet for HORVU7Hr1G018780.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G078800.1	Wheat	nucleus	77.1	89.56
TraesCS4A01G382400.1	Wheat	nucleus	81.74	81.98
Zm00001d045398_P001	Maize	nucleus	56.23	66.21
Os06t0140700-01	Rice	nucleus	58.26	65.26
EER87813	Sorghum	plastid	57.97	62.89
HORVU2Hr1G097940.2	Barley	nucleus	28.12	43.11
HORVU3Hr1G000250.1	Barley	nucleus	25.51	41.9
HORVU4Hr1G065900.5	Barley	nucleus	31.88	39.15
HORVU5Hr1G049790.1	Barley	nucleus	22.32	34.38
HORVU7Hr1G098230.1	Barley	nucleus	22.32	34.38
HORVU1Hr1G055930.1	Barley	nucleus	32.75	31.3
HORVU1Hr1G082910.2	Barley	nucleus	28.12	30.99
HORVU6Hr1G021870.1	Barley	nucleus, plastid	20.58	28.86
HORVU5Hr1G067010.2	Barley	nucleus	31.88	27.99

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	UniProt:A0A287VL84	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU7Hr1G018780	EnsemblPlants:HORVU7Hr1G018780.2	InterPro:HTH_motif	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183
PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF210	SMART:SM00340
SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000B48632F	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:-:25253924..25255754

Molecular Weight (calculated)

36291.6 Da

IEP (calculated)

9.488

GRAVY (calculated)

-0.561

Length

345 amino acids

Sequence
(BLAST)

001: PRAKHHITTT TTTPAEHCHR TTGELSDRIG FAGAEETMMH RTAGLDLGLG LGLGLGLASQ GSLTSSTTTA SSSPSTPASQ AHAHWTAALS SVVGLPQDCG
101: VLRKEEPGMR TSTSPESGVS GGTKRGLLDR TGSGVSRGAA AGSDEDDDGG DGAGGRKKLR LSKDQAAVLE ECFKTHSTLN PKQKTALANR LGLRPRQVEV
201: WFQNRRARTK LKQTEVDCEY MKRWCEQLAD QNKRLEKEVA ELRALKAAPA AHAQQAAPAA TLTMCPSCRR VAATAGAGPA ATQHQQQPQQ CHPKPSAQPA
301: GNVLPSHCQF FPATSAAAAA ADRSAARQQG AWNGAAQPLV TRELF

Best Arabidopsis Sequence Match ( AT3G60390.1 )
(BLAST)

001: MSERDDGLGL SLSLSLGFNQ KDPSSRLNPM PLASYASSSH MQHMQQSNYN HPQKIQNTWI NMFQSSERNS DMRSFLRGID VNRAPSTVVV DVEDEGAGVS
101: SPNSTVSSVM SGKKSERELM AAAGAVGGGR VEDNEIERAS CSLGGGSDDE DGSGNGDDSS RKKLRLSKEQ ALVLEETFKE HSTLNPKQKM ALAKQLNLRT
201: RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ENLTDENRRL QKEVSELRAL KLSPHLYMHM KPPTTLTMCP SCERVAVTSS SSSVAPPVMN SSSPMGPMSP
301: WAAMPLRQRP AAGSH

Arabidopsis Description

HAT3Homeobox-leucine zipper protein HAT3 [Source:UniProtKB/Swiss-Prot;Acc:P46602]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.