Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G066800.6 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G06710.1 | HORVU3Hr1G066800.6 | AT4G26100.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0447000-00 | Rice | nucleus | 21.37 | 93.33 |
| TraesCS5D01G235300.1 | Wheat | nucleus | 74.55 | 86.43 |
| TraesCS5B01G231300.1 | Wheat | nucleus | 76.59 | 84.79 |
| TraesCS5A01G232700.1 | Wheat | nucleus | 74.05 | 82.91 |
| Zm00001d020670_P001 | Maize | nucleus | 60.31 | 71.17 |
| EER98990 | Sorghum | nucleus | 63.1 | 67.21 |
| GSMUA_Achr3P07740_001 | Banana | nucleus | 33.08 | 67.01 |
| GSMUA_Achr9P15710_001 | Banana | nucleus | 46.06 | 58.01 |
| Zm00001d005875_P001 | Maize | nucleus | 42.24 | 51.08 |
| HORVU2Hr1G097940.2 | Barley | nucleus | 28.5 | 49.78 |
| GSMUA_Achr7P02380_001 | Banana | nucleus | 36.39 | 49.65 |
| HORVU3Hr1G000250.1 | Barley | nucleus | 26.21 | 49.05 |
| KRH67080 | Soybean | nucleus | 35.88 | 48.96 |
| VIT_08s0007g06670.t01 | Wine grape | nucleus | 40.71 | 48.34 |
| KRG95402 | Soybean | nucleus, plastid | 35.62 | 47.95 |
| VIT_13s0156g00260.t01 | Wine grape | nucleus | 42.49 | 46.65 |
| KRH38083 | Soybean | nucleus | 38.17 | 45.87 |
| KRH71831 | Soybean | plastid | 38.17 | 45.59 |
| CDX81016 | Canola | nucleus | 29.52 | 44.62 |
| HORVU4Hr1G065900.5 | Barley | nucleus | 31.55 | 44.13 |
| GSMUA_Achr8P22800_001 | Banana | nucleus | 29.26 | 43.4 |
| KRH43419 | Soybean | nucleus | 40.97 | 42.71 |
| KRH13873 | Soybean | nucleus | 41.48 | 42.45 |
| Solyc01g073910.2.1 | Tomato | nucleus | 38.93 | 41.92 |
| PGSC0003DMT400016146 | Potato | nucleus | 39.44 | 41.55 |
| AT5G06710.1 | Thale cress | nucleus | 35.37 | 41.37 |
| CDX98948 | Canola | nucleus | 35.62 | 41.3 |
| CDX70076 | Canola | nucleus | 35.62 | 41.18 |
| Bra009219.1-P | Field mustard | nucleus | 35.62 | 41.18 |
| PGSC0003DMT400060951 | Potato | nucleus | 36.64 | 41.03 |
| Solyc10g080540.1.1 | Tomato | nucleus | 36.9 | 40.96 |
| HORVU1Hr1G082910.2 | Barley | nucleus | 31.3 | 39.3 |
| Bra005907.1-P | Field mustard | nucleus | 32.06 | 39.13 |
| CDY55775 | Canola | nucleus | 31.3 | 38.2 |
| HORVU7Hr1G098230.1 | Barley | nucleus | 21.37 | 37.5 |
| HORVU5Hr1G049790.1 | Barley | nucleus | 21.37 | 37.5 |
| HORVU1Hr1G055930.1 | Barley | nucleus | 31.81 | 34.63 |
| HORVU6Hr1G021870.1 | Barley | nucleus, plastid | 21.63 | 34.55 |
| CDX78884 | Canola | nucleus | 22.14 | 34.52 |
| HORVU7Hr1G018780.2 | Barley | nucleus | 27.99 | 31.88 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | UniProt:A0A287RL26 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU5Hr1G067010 | EnsemblPlants:HORVU5Hr1G067010.2 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF514 | SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI000B483A28 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:509830813..509832804
Molecular Weight (calculated)
42283.4 Da
IEP (calculated)
6.622
GRAVY (calculated)
-0.591
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: THTNTTTHTE RRREGESRPC PRPYKTSESL RVYTVPYPTI IAGPTCCWWA SVDLMELGLS LGEAMADAGR ELVLGLGVGP RARREEEDEE GRRGQDVAAR
101: RGLALRCGSS PEPTMRLALL PLVPTLGFPW PSDTRHLEAS TRGFDVNQAP SSGGSAWGAC AAAAAEEEEQ EDTAAAARAA VSSSPNDNDS GGSFPMDFSA
201: QGDRDAAPAG GGGGSRGSDE DDGGSARKKL RLSKEQAAFL EDSFKEHSTL NTKQKVALAK QLNLLPRQVE VWFQNRRART KLKQTEVDCE YLKRCCETLT
301: EENRRLQKEL AELRALKSVH PFYMHLPATT LSMCPSCERV ASNSAPAPSP AGIAAAPEQQ HRPSSFAALF SSARSFPLAS SPSQAPMPAP SSS
101: RGLALRCGSS PEPTMRLALL PLVPTLGFPW PSDTRHLEAS TRGFDVNQAP SSGGSAWGAC AAAAAEEEEQ EDTAAAARAA VSSSPNDNDS GGSFPMDFSA
201: QGDRDAAPAG GGGGSRGSDE DDGGSARKKL RLSKEQAAFL EDSFKEHSTL NTKQKVALAK QLNLLPRQVE VWFQNRRART KLKQTEVDCE YLKRCCETLT
301: EENRRLQKEL AELRALKSVH PFYMHLPATT LSMCPSCERV ASNSAPAPSP AGIAAAPEQQ HRPSSFAALF SSARSFPLAS SPSQAPMPAP SSS
001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
Arabidopsis Description
HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.