Factsheet for HORVU4Hr1G065900.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G059600.1	Wheat	nucleus	90.75	92.73
TraesCS4D01G236600.1	Wheat	nucleus	90.39	92.7
TraesCS4B01G235300.2	Wheat	nucleus	91.46	92.11
Os03t0231150-00	Rice	cytosol, extracellular	27.4	71.96
EER92607	Sorghum	nucleus	74.38	69.9
Zm00001d028304_P001	Maize	nucleus	70.82	68.15
Zm00001d047995_P001	Maize	nucleus	67.62	64.19
HORVU3Hr1G000250.1	Barley	nucleus	39.86	53.33
HORVU2Hr1G097940.2	Barley	nucleus	35.94	44.89
HORVU5Hr1G049790.1	Barley	nucleus	32.74	41.07
HORVU7Hr1G098230.1	Barley	nucleus	32.74	41.07
HORVU7Hr1G018780.2	Barley	nucleus	39.15	31.88
HORVU1Hr1G055930.1	Barley	nucleus	40.93	31.86
HORVU5Hr1G067010.2	Barley	nucleus	44.13	31.55
HORVU1Hr1G082910.2	Barley	nucleus	34.88	31.31
HORVU6Hr1G021870.1	Barley	nucleus, plastid	27.4	31.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:HORVU4Hr1G065900	EnsemblPlants:HORVU4Hr1G065900.5	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:Leu_zip_homeo	UniProt:M0XKJ3	PFAM:PF00046	PFAM:PF02183	PFscan:PS50071	PANTHER:PTHR24326
PANTHER:PTHR24326:SF271	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002958453	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:548687602..548689065

Molecular Weight (calculated)

30294.8 Da

IEP (calculated)

7.861

GRAVY (calculated)

-0.552

Length

281 amino acids

Sequence
(BLAST)

001: MAQEEVHDAG LALGLSLGGG SSSAHRSNNS SRLTLWEAPS AEPSLTLSMP DDPTMTGRTA SGGVSSMSVG GAVKRERAEE AELGEMVSST AVVAAEEDDD
101: GSTRKKLRLT KEQSALLEDR FKEHSTLNPK QKVALAKQLN LRPRQVEVWF QNRRARLVTL TKLKQTEVDC EFLKRCCESL TEENRRLQRE LQELRAIKFA
201: PPPPPPPPPN NAGQHPGTPS AAAAPAPAPP FYMQLPAATL TICPSCERLS GTAATAAGKV DPDRPKATHH FFNPFTHSAA C

Best Arabidopsis Sequence Match ( AT2G22800.1 )
(BLAST)

001: MGFDDTCNTG LVLGLGPSPI PNNYNSTIRQ SSVYKLEPSL TLCLSGDPSV TVVTGADQLC RQTSSHSGVS SFSSGRVVKR ERDGGEESPE EEEMTERVIS
101: DYHEDEEGIS ARKKLRLTKQ QSALLEESFK DHSTLNPKQK QVLARQLNLR PRQVEVWFQN RRARTKLKQT EVDCEFLKKC CETLADENIR LQKEIQELKT
201: LKLTQPFYMH MPASTLTKCP SCERIGGGGG GNGGGGGGSG ATAVIVDGST AKGAFSISSK PHFFNPFTNP SAAC

Arabidopsis Description

HAT9HAT9 [Source:UniProtKB/TrEMBL;Acc:A0A178VZE8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.