Factsheet for Os03t0231150-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

extracellular: 26072143

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0447000-00	Rice	nucleus	27.1	32.22
TraesCS4A01G059600.1	Wheat	nucleus	73.83	28.73
TraesCS4D01G236600.1	Wheat	nucleus	71.96	28.1
TraesCS4B01G235300.2	Wheat	nucleus	72.9	27.96
HORVU4Hr1G065900.5	Barley	nucleus	71.96	27.4
EER92607	Sorghum	nucleus	71.03	25.42
Zm00001d028304_P001	Maize	nucleus	66.36	24.32
Zm00001d047995_P001	Maize	nucleus	61.68	22.3
Os04t0548700-01	Rice	nucleus	42.99	18.62
Os01t0643600-00	Rice	nucleus	34.58	16.16
Os10t0561800-01	Rice	nucleus	42.99	14.79
Os06t0140400-01	Rice	nucleus	34.58	14.45
Os06t0698200-00	Rice	nucleus	33.64	14.06
Os02t0565600-01	Rice	extracellular, nucleus	39.25	12.03
Os06t0140700-01	Rice	nucleus	34.58	12.01
Os02t0149900-00	Rice	nucleus	21.5	9.27

Protein Annotations

MapMan:35.1	UniProt:A0A0P0VVB0	ProteinID:BAS83101.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Leu_zip_homeo	EnsemblPlantsGene:Os03g0231150
EnsemblPlants:Os03t0231150-00	PFAM:PF02183	PANTHER:PTHR24326	PANTHER:PTHR24326:SF271	SMART:SM00340	UniParc:UPI000393985C
SEG:seg	:	:	:	:	:

Description

Similar to Hox19 (Fragment). (Os03t0231150-00)

Coordinates

chr3:+:6933005..6933836

Molecular Weight (calculated)

11473.7 Da

IEP (calculated)

8.137

GRAVY (calculated)

-0.327

Length

107 amino acids

Sequence
(BLAST)

001: VDCEFLKRCC ETLTEENRRL QRELQELRAL KFAPPPPSSA AHQPSPAPPA PFYMQLPAAT LTICPSCERV GGPASAAKVV AADGTKAGPG RTTTHHFFNP
101: FTHSAAC

Best Arabidopsis Sequence Match ( AT4G37790.1 )
(BLAST)

001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC

Arabidopsis Description

HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.