Factsheet for Os02t0149900-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0447000-00	Rice	nucleus	18.95	52.22
TraesCS6D01G110400.1	Wheat	nucleus	39.52	51.04
TraesCSU01G087400.1	Wheat	nucleus	41.53	49.28
TraesCS6B01G148800.1	Wheat	nucleus	41.53	49.28
EES04526	Sorghum	nucleus	51.21	49.03
TraesCS6A01G120300.1	Wheat	nucleus	39.11	47.78
TraesCS6B01G148700.1	Wheat	nucleus	39.52	46.89
Zm00001d000303_P001	Maize	nucleus	50.81	46.84
GSMUA_Achr7P15910_001	Banana	nucleus	28.63	46.1
TraesCS6A01G120600.1	Wheat	nucleus	41.53	45.58
TraesCS6D01G110600.1	Wheat	nucleus	41.13	45.33
TraesCS6B01G149000.1	Wheat	nucleus	39.92	45.0
GSMUA_Achr10P...	Banana	nucleus	31.45	42.86
HORVU6Hr1G021870.1	Barley	nucleus, plastid	41.13	41.46
PGSC0003DMT400096970	Potato	nucleus	29.84	37.37
Solyc07g054380.1.1	Tomato	nucleus	30.65	36.72
Os06t0698200-00	Rice	nucleus	35.89	34.77
GSMUA_Achr2P04490_001	Banana	nucleus	30.24	32.89
GSMUA_Achr7P05000_001	Banana	nucleus	24.6	32.8
GSMUA_Achr1P10390_001	Banana	nucleus	29.84	31.9
KRH19131	Soybean	nucleus	26.61	30.99
KRH12370	Soybean	nucleus	27.82	30.53
Os06t0140400-01	Rice	nucleus	31.05	30.08
KRH02731	Soybean	nucleus	25.0	29.67
Os01t0643600-00	Rice	nucleus	27.02	29.26
Os04t0548700-01	Rice	nucleus	29.03	29.15
KRH37372	Soybean	nucleus	27.42	28.69
Os06t0140700-01	Rice	nucleus	31.45	25.32
Os10t0561800-01	Rice	nucleus	31.45	25.08
Os03t0231150-00	Rice	cytosol, extracellular	9.27	21.5
Os02t0565600-01	Rice	extracellular, nucleus	29.03	20.63

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:107276233	MapMan:15.5.3.1	ProteinID:BAD38043.1	ProteinID:BAS76996.1	ncoils:Coil
ProteinID:EAZ21752.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo
EnsemblPlantsGene:Os02g0149900	EnsemblPlants:Os02t0149900-00	PFAM:PF00046	PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF219	UniProt:Q67UX6	SMART:SM00340	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI0000426457	RefSeq:XP_015624893.1	SEG:seg	:	:

Description

HOMEOBOX GENE 26Putative homeobox-leucine zipper protein HOX26. (Os02t0149900-00)

Coordinates

chr2:+:2757660..2758714

Molecular Weight (calculated)

26665.3 Da

IEP (calculated)

9.551

GRAVY (calculated)

-0.667

Length

248 amino acids

Sequence
(BLAST)

001: MSSSSLTTTS SMDSVVDGGL DTRLSLAVGC CPPRRRPVLL FGEVLPSPEK KVAAAAVVAA GKRGREQRGE AEAEATTTRQ RRSCKKGRRG RGDDDDDDGD
101: RRSPSGGGGD EEGASRKKLR LTGEQATLLE DSFRAHNILS HAEKQELAGK LGLSARQVEV WFQNRRARTK LKQTEADCDL LRRWCDHLAA DNARLRRDLA
201: ELRRSSSSPP VSGLAVATPV VCPSCAHDDK RRLAFATAAA AAGDMASN

Best Arabidopsis Sequence Match ( AT5G47370.1 )
(BLAST)

001: MMMGKEDLGL SLSLGFSQNH NPLQMNLNPN SSLSNNLQRL PWNQTFDPTS DLRKIDVNSF PSTVNCEEDT GVSSPNSTIS STISGKRSER EGISGTGVGS
101: GDDHDEITPD RGYSRGTSDE EEDGGETSRK KLRLSKDQSA FLEETFKEHN TLNPKQKLAL AKKLNLTARQ VEVWFQNRRA RTKLKQTEVD CEYLKRCVEK
201: LTEENRRLQK EAMELRTLKL SPQFYGQMTP PTTLIMCPSC ERVGGPSSSN HHHNHRPVSI NPWVACAGQV AHGLNFEALR PRS

Arabidopsis Description

HAT2Homeobox-leucine zipper protein HAT2 [Source:UniProtKB/Swiss-Prot;Acc:P46601]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.