Factsheet for Os06t0140700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0447000-00	Rice	nucleus	22.73	77.78
Zm00001d045398_P001	Maize	nucleus	71.75	75.43
EER87813	Sorghum	plastid	74.35	72.01
TraesCS7D01G078800.1	Wheat	nucleus	64.94	67.34
HORVU7Hr1G018780.2	Barley	nucleus	65.26	58.26
TraesCS4A01G382400.1	Wheat	nucleus	64.61	57.85
TraesCS7A01G084000.1	Wheat	nucleus	52.27	55.33
TraesCS4A01G382300.1	Wheat	nucleus	50.97	55.09
TraesCS7D01G078900.1	Wheat	nucleus	49.03	53.93
Os06t0140400-01	Rice	nucleus	43.51	52.34
TraesCS7A01G083900.1	Wheat	nucleus	28.9	47.09
Os04t0548700-01	Rice	nucleus	30.84	38.46
Os01t0643600-00	Rice	nucleus	28.25	37.99
Os10t0561800-01	Rice	nucleus	36.36	36.01
Os03t0231150-00	Rice	cytosol, extracellular	12.01	34.58
Os02t0565600-01	Rice	extracellular, nucleus	36.69	32.38
Os02t0149900-00	Rice	nucleus	25.32	31.45
Os06t0698200-00	Rice	nucleus	25.65	30.86

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:4340070	EMBL:AK105150	ProteinID:BAD68682.1	ProteinID:BAF18667.1
ProteinID:BAS96077.1	ncoils:Coil	ProteinID:EEE65059.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:Leu_zip_homeo	EnsemblPlantsGene:Os06g0140700	EnsemblPlants:Os06t0140700-01	PFAM:PF00046	PFAM:PF02183
PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF210	UniProt:Q5VPE3
SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0000006647	RefSeq:XP_015641839.1	SEG:seg

Description

HOMEOBOX GENE 2Similar to Homeodomain leucine zipper protein (Fragment). (Os06t0140700-01)

Coordinates

chr6:+:2137590..2139091

Molecular Weight (calculated)

32086.5 Da

IEP (calculated)

9.149

GRAVY (calculated)

-0.393

Length

308 amino acids

Sequence
(BLAST)

001: MMDLGLSLGL GLASQGSLTS STTTTSSPGA GSSSPWAAAL NSIVGDVRRD QAAAHAAAAV GVGVGGEEMY QGRASTSPDS AAALSSASGK RERELERSGS
101: GVDDDDGADG AGGRKKLRLS KDQAAVLEEC FKTHSTLNPK QKVALANRLG LRPRQVEVWF QNRRARTKLK QTEVDCEYLK RWCERLADEN KRLEKELADL
201: RALKAAPSPA SASAMQPSSS AAATLTMCPS CRRVATAGAP HQPNHQQCHP KSNTTISSSS TAAAAVAVAG GNVLPSHCQF FPAAAAAADR TSQSTWNAAA
301: PLVTRELF

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.