Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G382300.1 | Wheat | nucleus | 76.72 | 50.88 |
| TraesCS7A01G084000.1 | Wheat | nucleus | 74.6 | 48.45 |
| TraesCS7D01G078900.1 | Wheat | nucleus | 70.37 | 47.5 |
| TraesCS7A01G083800.1 | Wheat | nucleus | 65.08 | 46.24 |
| TraesCS4A01G382200.1 | Wheat | nucleus | 65.08 | 46.24 |
| EER87813 | Sorghum | plastid | 52.91 | 31.45 |
| Zm00001d045398_P001 | Maize | nucleus | 48.15 | 31.06 |
| TraesCS4A01G382400.1 | Wheat | nucleus | 53.97 | 29.65 |
| Os06t0140700-01 | Rice | nucleus | 47.09 | 28.9 |
| TraesCS2A01G415900.1 | Wheat | nucleus | 28.57 | 23.79 |
| TraesCS4A01G059600.1 | Wheat | nucleus | 32.8 | 22.55 |
| TraesCS3A01G231600.1 | Wheat | nucleus | 25.4 | 21.62 |
| TraesCS1A01G219200.1 | Wheat | nucleus | 33.86 | 19.45 |
| TraesCS6A01G120300.1 | Wheat | nucleus | 20.11 | 18.72 |
| TraesCS5A01G232700.1 | Wheat | nucleus | 33.33 | 17.95 |
| TraesCS1A01G372900.1 | Wheat | nucleus | 28.57 | 17.7 |
| TraesCS6A01G120600.1 | Wheat | nucleus | 19.58 | 16.37 |
| TraesCS7A01G423800.1 | Wheat | nucleus | 17.99 | 15.53 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 |
| ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF233 | SMART:SM00389 | SUPFAM:SSF46689 |
| EnsemblPlantsGene:TraesCS7A01G083900 | EnsemblPlants:TraesCS7A01G083900.1 | TIGR:cd00086 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7A:+:48583505..48584599
Molecular Weight (calculated)
20039.7 Da
IEP (calculated)
10.967
GRAVY (calculated)
-0.575
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSTSPESG ISAGTKRGLE HTSSGVFPAA SSDEDDGGGD GAGGRKNLRM SKDQSAVLEE CFKTHSALNP KQNKALANRL GLRPQQVEVW FHNRRARTKL
101: KQTALKAAPQ AHNGASEGPL TTLTMSLSRK RVASTSSASA CTVPRFSANA GTGMPMPSLK EWQFFCAFRD TGAMYGGSSR LAKVVKPAR
101: KQTALKAAPQ AHNGASEGPL TTLTMSLSRK RVASTSSASA CTVPRFSANA GTGMPMPSLK EWQFFCAFRD TGAMYGGSSR LAKVVKPAR
001: MMFEKDDLGL SLGLNFPKKQ INLKSNPSVS VTPSSSSFGL FRRSSWNESF TSSVPNSDSS QKETRTFIRG IDVNRPPSTA EYGDEDAGVS SPNSTVSSST
101: GKRSEREEDT DPQGSRGISD DEDGDNSRKK LRLSKDQSAI LEETFKDHST LNPKQKQALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC EFLRRCCENL
201: TEENRRLQKE VTELRALKLS PQFYMHMSPP TTLTMCPSCE HVSVPPPQPQ AATSAHHRSL PVNAWAPATR ISHGLTFDAL RPRS
101: GKRSEREEDT DPQGSRGISD DEDGDNSRKK LRLSKDQSAI LEETFKDHST LNPKQKQALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC EFLRRCCENL
201: TEENRRLQKE VTELRALKLS PQFYMHMSPP TTLTMCPSCE HVSVPPPQPQ AATSAHHRSL PVNAWAPATR ISHGLTFDAL RPRS
Arabidopsis Description
HAT4Homeobox-leucine zipper protein HAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q05466]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.