Factsheet for TraesCS6A01G120300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G110400.1	Wheat	nucleus	81.28	85.94
TraesCSU01G087400.1	Wheat	nucleus	87.19	84.69
TraesCS6B01G148800.1	Wheat	nucleus	87.19	84.69
TraesCS6B01G148700.1	Wheat	nucleus	85.22	82.78
TraesCS6A01G120600.1	Wheat	nucleus	67.98	61.06
GSMUA_Achr7P15910_001	Banana	nucleus	36.45	48.05
GSMUA_Achr10P...	Banana	nucleus	37.93	42.31
TraesCS7A01G423800.1	Wheat	nucleus	43.84	40.64
Os02t0149900-00	Rice	nucleus	47.78	39.11
Zm00001d000303_P001	Maize	nucleus	49.75	37.55
PGSC0003DMT400096970	Potato	nucleus	35.96	36.87
EES04526	Sorghum	nucleus	46.8	36.68
GSMUA_Achr7P05000_001	Banana	nucleus	33.0	36.02
Solyc07g054380.1.1	Tomato	nucleus	35.96	35.27
TraesCS2A01G415900.1	Wheat	nucleus	38.42	34.36
KRH19131	Soybean	nucleus	35.96	34.27
GSMUA_Achr2P04490_001	Banana	nucleus	37.93	33.77
KRH12370	Soybean	nucleus	37.44	33.63
KRH02731	Soybean	nucleus	33.5	32.54
GSMUA_Achr1P10390_001	Banana	nucleus	36.45	31.9
KRH37372	Soybean	nucleus	36.45	31.22
TraesCS3A01G231600.1	Wheat	nucleus	33.5	30.63
TraesCS4A01G382200.1	Wheat	nucleus	37.93	28.95
TraesCS7A01G083800.1	Wheat	nucleus	37.93	28.95
TraesCS4A01G059600.1	Wheat	nucleus	38.92	28.73
TraesCS4A01G382300.1	Wheat	nucleus	36.95	26.32
TraesCS7A01G084000.1	Wheat	nucleus	36.45	25.43
TraesCS1A01G219200.1	Wheat	nucleus	40.89	25.23
TraesCS1A01G372900.1	Wheat	nucleus	35.96	23.93
TraesCS5A01G232700.1	Wheat	nucleus	40.89	23.65
TraesCS4A01G382400.1	Wheat	nucleus	36.95	21.8
TraesCS7A01G083900.1	Wheat	nucleus	18.72	20.11

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	PRINTS:PR00031
ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF219	SMART:SM00340	SMART:SM00389
SUPFAM:SSF46689	EnsemblPlantsGene:TraesCS6A01G120300	EnsemblPlants:TraesCS6A01G120300.1	TIGR:cd00086	SEG:seg	:

Description

No Description!

Coordinates

chr6A:+:91924600..91925404

Molecular Weight (calculated)

22047.2 Da

IEP (calculated)

10.310

GRAVY (calculated)

-0.712

Length

203 amino acids

Sequence
(BLAST)

001: MSSASRESLE AEELVDTRLS LVIGAGSQPP PVQAPLLPPE AEGRVPGNTG RKKGEKWIVG GSTRQHGKRA RAAHGGSDVD DGDDGGDAAG RARKKLRLTA
101: EQAALLEKSF RAHNVLSHGE KQDLAGQLGL KPRQVEVWFQ NRRARTKLKQ TELDCELLRR WCERLSDDNA RLRRELAETR AVLLVGGSKG STLTGCPSCN
201: RLA

Best Arabidopsis Sequence Match ( AT3G60390.1 )
(BLAST)

001: MSERDDGLGL SLSLSLGFNQ KDPSSRLNPM PLASYASSSH MQHMQQSNYN HPQKIQNTWI NMFQSSERNS DMRSFLRGID VNRAPSTVVV DVEDEGAGVS
101: SPNSTVSSVM SGKKSERELM AAAGAVGGGR VEDNEIERAS CSLGGGSDDE DGSGNGDDSS RKKLRLSKEQ ALVLEETFKE HSTLNPKQKM ALAKQLNLRT
201: RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ENLTDENRRL QKEVSELRAL KLSPHLYMHM KPPTTLTMCP SCERVAVTSS SSSVAPPVMN SSSPMGPMSP
301: WAAMPLRQRP AAGSH

Arabidopsis Description

HAT3Homeobox-leucine zipper protein HAT3 [Source:UniProtKB/Swiss-Prot;Acc:P46602]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.