Factsheet for TraesCS4A01G059600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G236600.1	Wheat	nucleus	97.45	97.81
TraesCS4B01G235300.2	Wheat	nucleus	96.0	94.62
HORVU4Hr1G065900.5	Barley	nucleus	92.73	90.75
Os03t0231150-00	Rice	cytosol, extracellular	28.73	73.83
EER92607	Sorghum	nucleus	76.0	69.9
Zm00001d028304_P001	Maize	nucleus	71.64	67.47
Zm00001d047995_P001	Maize	nucleus	70.18	65.2
TraesCS2A01G415900.1	Wheat	nucleus	38.18	46.26
TraesCS3A01G231600.1	Wheat	nucleus	36.0	44.59
TraesCS7A01G423800.1	Wheat	nucleus	33.82	42.47
TraesCS6A01G120300.1	Wheat	nucleus	28.73	38.92
TraesCS7A01G083800.1	Wheat	nucleus	36.36	37.59
TraesCS4A01G382200.1	Wheat	nucleus	36.0	37.22
TraesCS5A01G232700.1	Wheat	nucleus	46.55	36.47
TraesCS4A01G382300.1	Wheat	nucleus	37.45	36.14
TraesCS1A01G219200.1	Wheat	nucleus	42.18	35.26
TraesCS7A01G084000.1	Wheat	nucleus	36.36	34.36
TraesCS6A01G120600.1	Wheat	nucleus	28.0	34.07
TraesCS7A01G083900.1	Wheat	nucleus	22.55	32.8
TraesCS1A01G372900.1	Wheat	nucleus	36.0	32.46
TraesCS4A01G382400.1	Wheat	nucleus	40.0	31.98

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF271	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	EnsemblPlantsGene:TraesCS4A01G059600
EnsemblPlants:TraesCS4A01G059600.1	TIGR:cd00086	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:56143977..56145391

Molecular Weight (calculated)

29375.5 Da

IEP (calculated)

7.154

GRAVY (calculated)

-0.609

Length

275 amino acids

Sequence
(BLAST)

001: MSQEEVHDAG LALGLSLGGG GGGGGDGSSS AHRGSNSGRL TLWEAEPSLT LSMPDDTTMT GTASGGVSSM SVGGAVKRER AEEAELGEMV SSTAVGAEED
101: DDGSTRKKLR LTKEQSALLE DRFKEHSTLN PKQKVALAKQ LNLRPRQVEV WFQNRRARTK LKQTEVDCEF LKRCCETLTE ENRRLQRELQ ELRAIKFAPP
201: PPPPNNASQH PGTPSSAAAP PAPFYMQLPA ATLTICPSCE RLGGTAAAAT GKVDPDRPKA ATHHFFNPFT HSAAC

Best Arabidopsis Sequence Match ( AT4G37790.1 )
(BLAST)

001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC

Arabidopsis Description

HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.