Factsheet for Zm00001d047995_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92607	Sorghum	nucleus	83.11	82.27
Zm00001d028304_P001	Maize	nucleus	79.05	80.14
TraesCS4A01G059600.1	Wheat	nucleus	65.2	70.18
TraesCS4D01G236600.1	Wheat	nucleus	64.19	69.34
TraesCS4B01G235300.2	Wheat	nucleus	65.2	69.18
HORVU4Hr1G065900.5	Barley	nucleus	64.19	67.62
Os03t0231150-00	Rice	cytosol, extracellular	22.3	61.68
Zm00001d030191_P001	Maize	nucleus	42.57	48.09
Zm00001d038941_P001	Maize	nucleus	12.16	46.15
Zm00001d002754_P001	Maize	nucleus	34.12	44.49
Zm00001d044081_P001	Maize	nucleus	32.43	42.67
Zm00001d014628_P001	Maize	nucleus	29.05	38.91
Zm00001d014630_P001	Maize	nucleus	31.08	37.25
Zm00001d045400_P001	Maize	nucleus	34.12	37.13
Zm00001d036118_P001	Maize	nucleus	32.43	36.78
Zm00001d014629_P001	Maize	nucleus	28.38	35.9
Zm00001d020670_P001	Maize	nucleus	40.2	35.74
Zm00001d005875_P001	Maize	nucleus	39.19	35.69
Zm00001d029934_P001	Maize	nucleus	37.84	34.89
Zm00001d045398_P001	Maize	nucleus	34.12	34.47
Zm00001d036510_P001	Maize	nucleus	28.72	33.46
Zm00001d050834_P001	Maize	nucleus	33.45	29.91
Zm00001d000303_P001	Maize	nucleus	26.35	29.0
Zm00001d031745_P001	Maize	plastid	41.89	27.99
Zm00001d009802_P001	Maize	nucleus, plastid	16.22	27.27
Zm00001d007525_P001	Maize	plasma membrane	19.59	21.01

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:103639392	MapMan:15.5.3.1	ProteinID:AQL08294.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	UniProt:K7WFM4	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF271	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689
UniParc:UPI000220B2C0	EnsemblPlantsGene:Zm00001d047995	EnsemblPlants:Zm00001d047995_P001	EnsemblPlants:Zm00001d047995_T001	SEG:seg	:

Description

Homeobox-transcription factor 62Putative homeobox DNA-binding and leucine zipper domain family protein

Coordinates

chr9:+:147605077..147607285

Molecular Weight (calculated)

31562.3 Da

IEP (calculated)

9.416

GRAVY (calculated)

-0.651

Length

296 amino acids

Sequence
(BLAST)

001: MAQEDVHLDD AGLALGLSLG GGGGGGASAA ARHGTSRSRL STEAPRTLEP PSLTLSMPDE ATATATGGSG GSGGAARSVS SRSVEGVKRE RVDDAEGERA
101: SSTAAAARAG AGAEDDDDGS TRKKLRLTKE QSKLLEDRFK DHSTLNPKQK IALAKQLKLR PRQVEVWFQN RRARTKLKQT EVDCELLKRC CESLSEENRR
201: LQRELQELRA LKQLAGPHPH QAPSSSPAAA TQGVPVPVPV PPPLYVQMQM QLPMPAATLS LCPSCERLRG GPKAEPDRPQ AATHRFFNPF THSAAC

Best Arabidopsis Sequence Match ( AT4G37790.1 )
(BLAST)

001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC

Arabidopsis Description

HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.