Factsheet for Zm00001d050834_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85171	Sorghum	nucleus	73.72	75.54
Os02t0565600-01	Rice	extracellular, nucleus	58.91	55.87
Zm00001d038941_P001	Maize	nucleus	10.88	46.15
Zm00001d002754_P001	Maize	nucleus	29.31	42.73
Zm00001d036118_P001	Maize	nucleus	32.93	41.76
Zm00001d045400_P001	Maize	nucleus	34.14	41.54
Zm00001d044081_P001	Maize	nucleus	25.08	36.89
Zm00001d014628_P001	Maize	nucleus	24.47	36.65
Zm00001d045398_P001	Maize	nucleus	32.33	36.52
Zm00001d030191_P001	Maize	nucleus	28.7	36.26
Zm00001d028304_P001	Maize	nucleus	30.82	34.93
Zm00001d014629_P001	Maize	nucleus	24.17	34.19
Zm00001d014630_P001	Maize	nucleus	25.38	34.01
Zm00001d005875_P001	Maize	nucleus	32.93	33.54
Zm00001d036510_P001	Maize	nucleus	25.68	33.46
Zm00001d047995_P001	Maize	nucleus	29.91	33.45
Zm00001d020670_P001	Maize	nucleus	33.23	33.03
HORVU1Hr1G082910.2	Barley	nucleus	30.82	32.59
Zm00001d029934_P001	Maize	nucleus	31.42	32.4
TraesCS1D01G379700.1	Wheat	nucleus	29.61	32.24
TraesCS1A01G372900.1	Wheat	nucleus	28.7	31.15
TraesCS1B01G393100.1	Wheat	nucleus	28.1	30.39
Zm00001d000303_P001	Maize	nucleus	22.05	27.14
Zm00001d009802_P001	Maize	nucleus, plastid	12.69	23.86
Zm00001d031745_P001	Maize	plastid	31.42	23.48
Zm00001d007525_P001	Maize	plasma membrane	15.41	18.48

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	UniProt:A0A1D6Q3J0	ProteinID:AQK53129.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF192	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000843014D
EnsemblPlantsGene:Zm00001d050834	EnsemblPlants:Zm00001d050834_P001	EnsemblPlants:Zm00001d050834_T001	SEG:seg	:	:

Description

Homeobox-transcription factor 56Putative homeobox DNA-binding and leucine zipper domain family protein

Coordinates

chr4:-:125421188..125423374

Molecular Weight (calculated)

35538.7 Da

IEP (calculated)

5.329

GRAVY (calculated)

-0.438

Length

331 amino acids

Sequence
(BLAST)

001: MELELSLGDS RAPAKSASTP AALTPIHAGA GGEGHELALE LGVGAAKRAE QDNQKTPVQP EHVQEEEEEE ETCPYSESPA ELSLIGCPLL PAASAEIGSV
101: NSSEVCVRRG FGVDAVLVDG GDAAQGRPAL STSFLPSEFL VRRQADDQEA AAEDEEMSGV GGGARKKLRL SKEQSAFLED SFKAHSTLTP KQKSDLAKRL
201: KLRPRQVEVW FQNRRARSKL KQTEVDCEYL KRWCEKLAQE NRRLQREVAE LRRLCSAAYP FYGAAAGFGV ATARVCPSSC DNDVSEAAIS GAPSAAAPPP
301: STLFASWPPH FGPFTVVVPP LLRRQPSATT S

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.