Factsheet for Os02t0565600-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0447000-00	Rice	nucleus	20.92	81.11
OQU85171	Sorghum	nucleus	55.3	59.75
Zm00001d050834_P001	Maize	nucleus	55.87	58.91
Os06t0140400-01	Rice	nucleus	31.81	43.36
Os04t0548700-01	Rice	nucleus	28.08	39.68
Os01t0643600-00	Rice	nucleus	25.79	39.3
Os03t0231150-00	Rice	cytosol, extracellular	12.03	39.25
Os06t0140700-01	Rice	nucleus	32.38	36.69
TraesCS1D01G379700.1	Wheat	nucleus	29.8	34.21
TraesCS1B01G393100.1	Wheat	nucleus	29.8	33.99
Os06t0698200-00	Rice	nucleus	24.93	33.98
TraesCS1A01G372900.1	Wheat	nucleus	29.51	33.77
HORVU1Hr1G082910.2	Barley	nucleus	29.8	33.23
Os10t0561800-01	Rice	nucleus	28.65	32.15
Os02t0149900-00	Rice	nucleus	20.63	29.03

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:4329705	EMBL:AK064118	ProteinID:BAD15830.1	ProteinID:BAF09082.1
ProteinID:BAS79301.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo
EnsemblPlantsGene:Os02g0565600	EnsemblPlants:Os02t0565600-01	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF192	UniProt:Q0E0A6	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689
UniParc:UPI0000DF075C	RefSeq:XP_015626174.1	SEG:seg	:	:	:

Description

HOMEOBOX GENE 7Similar to Homeodomain leucine zipper protein (Fragment). (Os02t0565600-01)

Coordinates

chr2:-:21487610..21489894

Molecular Weight (calculated)

37439.6 Da

IEP (calculated)

5.716

GRAVY (calculated)

-0.577

Length

349 amino acids

Sequence
(BLAST)

001: MELELSLGDS PAPVKATIAP TPVLIPTCMG DEEDLELVLG VRATRRDEQD DQTTCTQSSE EAMEGEEDET RPHGEAPVES LSFPLFVSSA ETGSANSEMC
101: TRGFDVNTRP ADGGAEAGRP SSPSSMQEAS TRQQVADQEA ADDEDNGGGG ARKKLRLSKE QSSFLEDSFK EHSTLTPKQK SDLANRLNLR PRQVEVWFQN
201: RRARTKLKQT EVDCEHLKRC CERLTRENRR LQREVAELRG TLRTTTSSYP PLYGLHHLPA AAGTVFRVCP SCEHSKVVAA AASESFSPRV FAGGGAPAAI
301: TAAAAVPSPG AGSPPSSSAA LFGARRPHFG PFAAAVIPPV LRRQPSATS

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.