Factsheet for TraesCS1D01G379700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G372900.1	Wheat	nucleus	92.11	91.8
TraesCS1B01G393100.1	Wheat	nucleus	91.78	91.18
HORVU1Hr1G082910.2	Barley	nucleus	82.89	80.51
TraesCS3D01G009700.1	Wheat	nucleus	28.95	38.94
TraesCS2D01G412900.1	Wheat	nucleus	28.95	38.26
TraesCS3D01G221800.1	Wheat	nucleus	27.63	37.84
TraesCS6D01G110400.1	Wheat	nucleus	23.68	37.5
TraesCS4D01G236600.1	Wheat	nucleus	32.57	36.13
TraesCS7D01G078900.1	Wheat	nucleus	33.22	36.07
TraesCS7D01G079000.1	Wheat	nucleus	31.91	36.06
TraesCS5D01G235300.1	Wheat	nucleus	39.8	35.69
TraesCS7D01G417700.1	Wheat	nucleus	25.99	35.59
TraesCS6D01G110600.1	Wheat	nucleus	24.67	33.33
TraesCS1D01G220900.1	Wheat	nucleus	35.2	32.82
TraesCS7D01G078800.1	Wheat	nucleus	31.25	31.99
OQU85171	Sorghum	nucleus	32.89	30.96
Os02t0565600-01	Rice	extracellular, nucleus	34.21	29.8
Zm00001d050834_P001	Maize	nucleus	32.24	29.61

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF192	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	EnsemblPlantsGene:TraesCS1D01G379700
EnsemblPlants:TraesCS1D01G379700.1	TIGR:cd00086	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:+:455759848..455761548

Molecular Weight (calculated)

33118.8 Da

IEP (calculated)

7.129

GRAVY (calculated)

-0.640

Length

304 amino acids

Sequence
(BLAST)

001: MELELSLGDL PTPVKANTMP APATCQGEDH DDLALGLRVT ATERAGQENQ RTSIETAEGE DSDEACPELP VRASPFRQAS AQTASANSRG FDVNAAVPVD
101: GRASTARSLS PPSMHMEVPV TQGVDEEGSE DEDNGGGRVR KKLRLSKEQS AFLESSFKEH STLTLEQKSC LANRLSLRPR QVEVWFQNRR ARTKLKQTEA
201: DCERLKRCCD ALARENRKLQ REVAELRASR APYPLYNLNH HMSGFATALP ACSSCDATAR STVSAVSSPG PSPMSTLFPG RPHFGPFTVT HPVPPLRRQP
301: SATL

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.