Factsheet for HORVU1Hr1G082910.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G379700.1	Wheat	nucleus	80.51	82.89
TraesCS1A01G372900.1	Wheat	nucleus	79.87	81.97
TraesCS1B01G393100.1	Wheat	nucleus	79.87	81.7
HORVU3Hr1G000250.1	Barley	nucleus	28.75	42.86
HORVU2Hr1G097940.2	Barley	nucleus	29.07	40.44
HORVU4Hr1G065900.5	Barley	nucleus	31.31	34.88
HORVU5Hr1G049790.1	Barley	nucleus	24.92	34.82
HORVU7Hr1G098230.1	Barley	nucleus	24.92	34.82
OQU85171	Sorghum	nucleus	33.55	32.51
HORVU5Hr1G067010.2	Barley	nucleus	39.3	31.3
Zm00001d050834_P001	Maize	nucleus	32.59	30.82
HORVU6Hr1G021870.1	Barley	nucleus, plastid	23.64	30.08
Os02t0565600-01	Rice	extracellular, nucleus	33.23	29.8
HORVU1Hr1G055930.1	Barley	nucleus	33.87	29.36
HORVU7Hr1G018780.2	Barley	nucleus	30.99	28.12

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	UniProt:A0A287GI72	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU1Hr1G082910	EnsemblPlants:HORVU1Hr1G082910.2	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF192	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689
UniParc:UPI000B473F89	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:530750147..530751997

Molecular Weight (calculated)

34239.4 Da

IEP (calculated)

7.254

GRAVY (calculated)

-0.569

Length

313 amino acids

Sequence
(BLAST)

001: FASSLPVPRP LPFLDMELEL SLGDLPAPVK ANTMPAPATC QGEDHDDLAL GLGVTATERA DQDNQRTSME TLEGEADSDE ACPKLSVRAS PLRQTASANL
101: RGFDVNAAIP VDGRASMARS SSPPSMHMEV PVTQGVDEEA SEDEENGGGR VRKKLRLSKE QSAFLEDSFK EHNTLTLEQK SRLANRLSLR PRQVEVWFQN
201: RRARTKLKQT EADCEHLKRH CEALARENRK LQREVAELRA YGRAPYPPYN HHLLSGFSTV LPAACPSCVA TTHSTIAAVS SPGPAASTLF PRPRFGAFTA
301: GHPVLRRQPS TTL

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.