Factsheet for HORVU5Hr1G049790.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G098230.1	Barley	nucleus	100.0	100.0
TraesCS7A01G423800.1	Wheat	nucleus	87.95	89.95
TraesCS7D01G417700.1	Wheat	nucleus	84.38	85.14
TraesCS7B01G326300.1	Wheat	nucleus	81.7	82.06
Zm00001d038941_P001	Maize	nucleus	19.2	55.13
Os06t0698200-00	Rice	nucleus	60.27	52.73
EER90307	Sorghum	nucleus	51.79	49.15
GSMUA_Achr7P15910_001	Banana	nucleus	33.48	48.7
Zm00001d014628_P001	Maize	nucleus	45.98	46.61
GSMUA_Achr10P...	Banana	nucleus	37.05	45.6
Zm00001d014630_P001	Maize	nucleus	50.0	45.34
Zm00001d014629_P001	Maize	nucleus	46.88	44.87
Zm00001d036510_P001	Maize	nucleus	48.21	42.52
PGSC0003DMT400096970	Potato	nucleus	34.38	38.89
KRH12370	Soybean	nucleus	38.84	38.5
HORVU3Hr1G000250.1	Barley	nucleus	35.27	37.62
Solyc07g054380.1.1	Tomato	nucleus	34.38	37.2
KRH37372	Soybean	nucleus	38.39	36.29
HORVU6Hr1G021870.1	Barley	nucleus, plastid	39.73	36.18
KRH19131	Soybean	nucleus	33.48	35.21
HORVU2Hr1G097940.2	Barley	nucleus	34.82	34.67
Zm00001d009802_P001	Maize	nucleus, plastid	26.79	34.09
GSMUA_Achr7P05000_001	Banana	nucleus	28.12	33.87
KRH02731	Soybean	nucleus	30.8	33.01
GSMUA_Achr2P04490_001	Banana	nucleus	33.48	32.89
HORVU4Hr1G065900.5	Barley	nucleus	41.07	32.74
GSMUA_Achr1P10390_001	Banana	nucleus	32.59	31.47
HORVU1Hr1G082910.2	Barley	nucleus	34.82	24.92
HORVU1Hr1G055930.1	Barley	nucleus	39.73	24.65
HORVU7Hr1G018780.2	Barley	nucleus	34.38	22.32
HORVU5Hr1G067010.2	Barley	nucleus	37.5	21.37
Zm00001d007525_P001	Maize	plasma membrane	24.11	19.57

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	UniProt:A0A287XI70	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G049790	EnsemblPlants:HORVU5Hr1G049790.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF252	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689
UniParc:UPI000B484123	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:386354434..386355371

Molecular Weight (calculated)

24868.6 Da

IEP (calculated)

10.474

GRAVY (calculated)

-0.847

Length

224 amino acids

Sequence
(BLAST)

001: YAREPGGMER QDLGAWLGLA TGGGAVWHPH DGERRPDPVR LNALFPRHGK EERDQDEQKT GGKGARRKMK VAYDDGRSSS SNGPCLSDGG GSDSGGGRRK
101: KLRLTKEQCA LLEGSFRAHN ILSHVKKQEL ARQLKLSSRQ VEVWFQNRRA RTKLKQTEVD CEFLRRWCES LTDENQRLKH QLLELQRSAA AAPAAAGSKL
201: FAQLPRAAAM VNLCPSCDKV AVKN

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.