Factsheet for Os06t0698200-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0447000-00	Rice	nucleus	23.44	66.67
TraesCS7D01G417700.1	Wheat	nucleus	54.69	63.06
TraesCS7A01G423800.1	Wheat	nucleus	52.73	61.64
TraesCS7B01G326300.1	Wheat	nucleus	53.12	60.99
HORVU5Hr1G049790.1	Barley	nucleus	52.73	60.27
HORVU7Hr1G098230.1	Barley	nucleus	52.73	60.27
Zm00001d038941_P001	Maize	nucleus	18.36	60.26
EER90307	Sorghum	nucleus	51.56	55.93
Zm00001d014628_P001	Maize	nucleus	45.31	52.49
Zm00001d014630_P001	Maize	nucleus	50.39	52.23
GSMUA_Achr7P15910_001	Banana	nucleus	30.47	50.65
Zm00001d014629_P001	Maize	nucleus	46.09	50.43
GSMUA_Achr10P...	Banana	nucleus	33.98	47.8
Zm00001d036510_P001	Maize	nucleus	43.75	44.09
KRH12370	Soybean	nucleus	35.55	40.27
PGSC0003DMT400096970	Potato	nucleus	30.86	39.9
Solyc07g054380.1.1	Tomato	nucleus	30.86	38.16
KRH37372	Soybean	nucleus	35.16	37.97
KRH19131	Soybean	nucleus	30.47	36.62
GSMUA_Achr7P05000_001	Banana	nucleus	26.17	36.02
GSMUA_Achr2P04490_001	Banana	nucleus	32.03	35.96
Os02t0149900-00	Rice	nucleus	34.77	35.89
Os04t0548700-01	Rice	nucleus	33.59	34.82
Zm00001d009802_P001	Maize	nucleus, plastid	23.83	34.66
Os01t0643600-00	Rice	nucleus	30.86	34.5
KRH02731	Soybean	nucleus	28.12	34.45
Os03t0231150-00	Rice	cytosol, extracellular	14.06	33.64
GSMUA_Achr1P10390_001	Banana	nucleus	30.08	33.19
Os10t0561800-01	Rice	nucleus	37.11	30.55
Os06t0140400-01	Rice	nucleus	28.12	28.12
Os06t0140700-01	Rice	nucleus	30.86	25.65
Os02t0565600-01	Rice	extracellular, nucleus	33.98	24.93
Zm00001d007525_P001	Maize	plasma membrane	21.88	20.29

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ProteinID:BAD54463.1	ProteinID:BAS99304.1	ncoils:Coil	ProteinID:EAZ38153.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	EnsemblPlantsGene:Os06g0698200	EnsemblPlants:Os06t0698200-00
PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF252
UniProt:Q5Z6F6	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0000447041	SEG:seg

Description

HOMEOBOX GENE 18Similar to Homeobox-leucine zipper protein HOX18. (Os06t0698200-00)

Coordinates

chr6:-:29198270..29199356

Molecular Weight (calculated)

27592.6 Da

IEP (calculated)

9.257

GRAVY (calculated)

-0.691

Length

256 amino acids

Sequence
(BLAST)

001: MEGEDLGSWL GLGIGGGGYA YGGDDCRRSP SSPSPVQMLF SQHVKEEITR GYDHGRDEEQ ASGSKIMKGE RGARLRVMRS IRNSGGDGSR SRVLSLGDDG
101: GDGGSGGGGG GGTRKKLQLT KEQSTLLEDS FRVHNILSHA QKHELARQLK LKPRQVEVWF QNRRARTKLK QTEVDCEFLK RCCESLTEEN KQLKHELMEL
201: RRLASPAAAA AGSQLYVQFP RAAAAAMVNV CPSCEKVTVM GGGGGETGKS SSSYSS

Best Arabidopsis Sequence Match ( AT4G37790.1 )
(BLAST)

001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC

Arabidopsis Description

HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.