Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014630_P001 | Maize | nucleus | 87.78 | 78.54 |
| Zm00001d014629_P001 | Maize | nucleus | 79.64 | 75.21 |
| EER90307 | Sorghum | nucleus | 76.47 | 71.61 |
| Zm00001d038941_P001 | Maize | nucleus | 23.98 | 67.95 |
| Zm00001d036510_P001 | Maize | nucleus | 63.35 | 55.12 |
| TraesCS7A01G423800.1 | Wheat | nucleus | 47.06 | 47.49 |
| GSMUA_Achr7P15910_001 | Banana | nucleus | 33.03 | 47.4 |
| TraesCS7D01G417700.1 | Wheat | nucleus | 46.61 | 46.4 |
| HORVU5Hr1G049790.1 | Barley | nucleus | 46.61 | 45.98 |
| HORVU7Hr1G098230.1 | Barley | nucleus | 46.61 | 45.98 |
| Os06t0698200-00 | Rice | nucleus | 52.49 | 45.31 |
| TraesCS7B01G326300.1 | Wheat | nucleus | 45.7 | 45.29 |
| Zm00001d009802_P001 | Maize | nucleus, plastid | 34.84 | 43.75 |
| GSMUA_Achr10P... | Banana | nucleus | 35.75 | 43.41 |
| PGSC0003DMT400096970 | Potato | nucleus | 36.65 | 40.91 |
| Solyc07g054380.1.1 | Tomato | nucleus | 37.1 | 39.61 |
| Zm00001d000303_P001 | Maize | nucleus | 44.34 | 36.43 |
| KRH12370 | Soybean | nucleus | 36.2 | 35.4 |
| Zm00001d002754_P001 | Maize | nucleus | 35.75 | 34.8 |
| KRH19131 | Soybean | nucleus | 33.03 | 34.27 |
| KRH37372 | Soybean | nucleus | 36.2 | 33.76 |
| GSMUA_Achr7P05000_001 | Banana | nucleus | 28.05 | 33.33 |
| GSMUA_Achr2P04490_001 | Banana | nucleus | 34.39 | 33.33 |
| Zm00001d030191_P001 | Maize | nucleus | 38.91 | 32.82 |
| KRH02731 | Soybean | nucleus | 30.77 | 32.54 |
| Zm00001d028304_P001 | Maize | nucleus | 41.18 | 31.16 |
| Zm00001d044081_P001 | Maize | nucleus | 30.77 | 30.22 |
| GSMUA_Achr1P10390_001 | Banana | nucleus | 31.22 | 29.74 |
| Zm00001d047995_P001 | Maize | nucleus | 38.91 | 29.05 |
| Zm00001d036118_P001 | Maize | nucleus | 33.03 | 27.97 |
| Zm00001d005875_P001 | Maize | nucleus | 40.72 | 27.69 |
| Zm00001d045400_P001 | Maize | nucleus | 33.48 | 27.21 |
| Zm00001d020670_P001 | Maize | nucleus | 40.72 | 27.03 |
| Zm00001d045398_P001 | Maize | nucleus | 32.58 | 24.57 |
| Zm00001d050834_P001 | Maize | nucleus | 36.65 | 24.47 |
| Zm00001d029934_P001 | Maize | nucleus | 34.84 | 23.99 |
| Zm00001d007525_P001 | Maize | plasma membrane | 29.41 | 23.55 |
| Zm00001d031745_P001 | Maize | plastid | 41.18 | 20.54 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | UniProt:A0A1D6GUM4 | ProteinID:AQK66672.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS51257 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF252 | SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI0001D83F58 | EnsemblPlantsGene:Zm00001d014628 | EnsemblPlants:Zm00001d014628_P001 | EnsemblPlants:Zm00001d014628_T001 | SEG:seg | : |
Description
Homeobox-transcription factor 42Homeobox-leucine zipper protein HAT9
Coordinates
chr5:+:56552093..56553397
Molecular Weight (calculated)
23803.3 Da
IEP (calculated)
9.337
GRAVY (calculated)
-0.533
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSTREEEGV GKSWLGLGIG GGSGGCDLMQ RNNRPPVQFD LLFPPQGVVE GVAASKKAEK GGGGRKRLKV VTGTADEDGQ QPPGARKKLR LTKAQSTLLE
101: DTFRAHSILS NAQKQELARQ VDLSARQVEV WFQNRRARTK LKQTEADCEI LKRCCESLTG ENQRLRLELA QLQGSEAGLY LQSSFPPLAA AMASVCPSCD
201: KVITVASGGE TSGRSSTSYS S
101: DTFRAHSILS NAQKQELARQ VDLSARQVEV WFQNRRARTK LKQTEADCEI LKRCCESLTG ENQRLRLELA QLQGSEAGLY LQSSFPPLAA AMASVCPSCD
201: KVITVASGGE TSGRSSTSYS S
001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
Arabidopsis Description
HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.