Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d011696_P002 | |
| Zm00001d043693_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G06710.1 | Zm00001d011696_P002 | AT4G26100.1 | 21798944 |
| AT5G06710.1 | Zm00001d043693_P002 | AT4G26100.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG25294 | Sorghum | nucleus | 70.2 | 81.41 |
| GSMUA_Achr3P07740_001 | Banana | nucleus | 29.57 | 67.53 |
| Zm00001d020670_P001 | Maize | nucleus | 46.73 | 62.16 |
| GSMUA_Achr9P15710_001 | Banana | nucleus | 39.05 | 55.45 |
| KRH67080 | Soybean | nucleus | 33.63 | 51.74 |
| Zm00001d002754_P001 | Maize | nucleus | 26.41 | 51.54 |
| KRG95402 | Soybean | nucleus, plastid | 33.41 | 50.68 |
| GSMUA_Achr7P02380_001 | Banana | nucleus | 32.73 | 50.35 |
| Zm00001d005875_P001 | Maize | nucleus | 36.34 | 49.54 |
| VIT_08s0007g06670.t01 | Wine grape | nucleus | 36.57 | 48.94 |
| VIT_13s0156g00260.t01 | Wine grape | nucleus | 37.7 | 46.65 |
| GSMUA_Achr8P22800_001 | Banana | nucleus | 27.31 | 45.66 |
| CDX81016 | Canola | nucleus | 26.64 | 45.38 |
| Zm00001d030191_P001 | Maize | nucleus | 26.64 | 45.04 |
| KRH71831 | Soybean | plastid | 33.41 | 44.98 |
| Zm00001d028304_P001 | Maize | nucleus | 29.57 | 44.86 |
| Solyc01g073910.2.1 | Tomato | nucleus | 36.79 | 44.66 |
| KRH38083 | Soybean | nucleus | 32.96 | 44.65 |
| PGSC0003DMT400016146 | Potato | nucleus | 36.79 | 43.7 |
| Zm00001d038941_P001 | Maize | nucleus | 7.67 | 43.59 |
| KRH43419 | Soybean | nucleus | 36.79 | 43.24 |
| Zm00001d029934_P001 | Maize | nucleus | 31.15 | 42.99 |
| KRH13873 | Soybean | nucleus | 37.25 | 42.97 |
| Zm00001d036118_P001 | Maize | nucleus | 25.06 | 42.53 |
| Zm00001d044081_P001 | Maize | nucleus | 21.44 | 42.22 |
| PGSC0003DMT400060951 | Potato | nucleus | 33.41 | 42.17 |
| AT5G06710.1 | Thale cress | nucleus | 31.83 | 41.96 |
| Zm00001d045400_P001 | Maize | nucleus | 25.73 | 41.91 |
| Zm00001d047995_P001 | Maize | nucleus | 27.99 | 41.89 |
| CDX98948 | Canola | nucleus | 32.05 | 41.89 |
| Solyc10g080540.1.1 | Tomato | nucleus | 33.41 | 41.81 |
| Bra005907.1-P | Field mustard | nucleus | 30.25 | 41.61 |
| CDX70076 | Canola | nucleus | 31.83 | 41.47 |
| Bra009219.1-P | Field mustard | nucleus | 31.83 | 41.47 |
| Zm00001d014628_P001 | Maize | nucleus | 20.54 | 41.18 |
| CDY55775 | Canola | nucleus | 29.57 | 40.68 |
| Zm00001d014630_P001 | Maize | nucleus | 21.22 | 38.06 |
| Zm00001d014629_P001 | Maize | nucleus | 20.09 | 38.03 |
| Zm00001d045398_P001 | Maize | nucleus | 23.7 | 35.84 |
| CDX78884 | Canola | nucleus | 19.86 | 34.92 |
| Zm00001d036510_P001 | Maize | nucleus | 19.64 | 34.25 |
| Zm00001d050834_P001 | Maize | nucleus | 23.48 | 31.42 |
| Zm00001d000303_P001 | Maize | nucleus | 18.74 | 30.86 |
| Zm00001d009802_P001 | Maize | nucleus, plastid | 10.84 | 27.27 |
| Zm00001d007525_P001 | Maize | plasma membrane | 13.09 | 21.01 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | UniProt:A0A1D6KL48 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | ProteinID:ONM03615.1 | PFAM:PF00046 | PFAM:PF02183 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF105 | SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0008DB350A |
| EnsemblPlantsGene:Zm00001d031745 | EnsemblPlants:Zm00001d031745_P001 | EnsemblPlants:Zm00001d031745_T001 | SEG:seg | : | : |
Description
Homeobox-transcription factor 129Homeobox-leucine zipper protein HAT3
Coordinates
chr1:-:200647593..200649580
Molecular Weight (calculated)
46240.9 Da
IEP (calculated)
9.016
GRAVY (calculated)
-0.214
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPCLLPFAG PLTCARQTAV PKGQNQARVL AACSVTRLAE LSHSHAVATL SPQLLLHNAR SSICRRYKPS LPSLYYGRLL LLLLVGVELF LGAGMELGLS
101: LGDAAVPDAG RAAPELGLGL GVGIGSNAAG TGRGSKAAGT TGTTGWWAAP ATPESAVRLS LVSSLGLQWP PPDGGRDEAP ARGFDVNRAP SVAGSALALE
201: DDEEEPGAAA LSSSPNDSAG SFPLDLGGPR AHAEGAAARA GGERSSSRAS DEDEGASARK KLRLSKEQSA FLEESFKEHS TLNPKQKAAL AKQLNLRPRQ
301: VEVWFQNRRA RTKLKQTEVD CEYLKRCCET LTEENRRLHK ELAELRALKT APPFFMRLPA TTLSMCPSCE RVASGPSPAS TSAPASSTPP ATAATTAISY
401: AAAAAAPVRA DHRPSSFAAL FAATRSFPLA SQPRPPAPAS NCL
101: LGDAAVPDAG RAAPELGLGL GVGIGSNAAG TGRGSKAAGT TGTTGWWAAP ATPESAVRLS LVSSLGLQWP PPDGGRDEAP ARGFDVNRAP SVAGSALALE
201: DDEEEPGAAA LSSSPNDSAG SFPLDLGGPR AHAEGAAARA GGERSSSRAS DEDEGASARK KLRLSKEQSA FLEESFKEHS TLNPKQKAAL AKQLNLRPRQ
301: VEVWFQNRRA RTKLKQTEVD CEYLKRCCET LTEENRRLHK ELAELRALKT APPFFMRLPA TTLSMCPSCE RVASGPSPAS TSAPASSTPP ATAATTAISY
401: AAAAAAPVRA DHRPSSFAAL FAATRSFPLA SQPRPPAPAS NCL
001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
Arabidopsis Description
HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.