Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014628_P001 | Maize | nucleus | 78.54 | 87.78 |
| Zm00001d038941_P001 | Maize | nucleus | 26.32 | 83.33 |
| EER90307 | Sorghum | nucleus | 77.73 | 81.36 |
| Zm00001d014629_P001 | Maize | nucleus | 74.09 | 78.21 |
| Zm00001d036510_P001 | Maize | nucleus | 65.59 | 63.78 |
| Zm00001d009802_P001 | Maize | nucleus, plastid | 37.25 | 52.27 |
| TraesCS7A01G423800.1 | Wheat | nucleus | 45.75 | 51.6 |
| Os06t0698200-00 | Rice | nucleus | 52.23 | 50.39 |
| HORVU5Hr1G049790.1 | Barley | nucleus | 45.34 | 50.0 |
| HORVU7Hr1G098230.1 | Barley | nucleus | 45.34 | 50.0 |
| TraesCS7D01G417700.1 | Wheat | nucleus | 44.94 | 50.0 |
| GSMUA_Achr7P15910_001 | Banana | nucleus | 30.36 | 48.7 |
| TraesCS7B01G326300.1 | Wheat | nucleus | 43.32 | 47.98 |
| GSMUA_Achr10P... | Banana | nucleus | 32.79 | 44.51 |
| PGSC0003DMT400096970 | Potato | nucleus | 34.82 | 43.43 |
| Solyc07g054380.1.1 | Tomato | nucleus | 35.63 | 42.51 |
| Zm00001d000303_P001 | Maize | nucleus | 43.32 | 39.78 |
| KRH12370 | Soybean | nucleus | 33.6 | 36.73 |
| Zm00001d002754_P001 | Maize | nucleus | 33.2 | 36.12 |
| KRH19131 | Soybean | nucleus | 30.77 | 35.68 |
| GSMUA_Achr2P04490_001 | Banana | nucleus | 32.39 | 35.09 |
| KRH37372 | Soybean | nucleus | 33.6 | 35.02 |
| Zm00001d030191_P001 | Maize | nucleus | 36.44 | 34.35 |
| KRH02731 | Soybean | nucleus | 28.34 | 33.49 |
| GSMUA_Achr7P05000_001 | Banana | nucleus | 24.7 | 32.8 |
| Zm00001d028304_P001 | Maize | nucleus | 38.06 | 32.19 |
| GSMUA_Achr1P10390_001 | Banana | nucleus | 29.55 | 31.47 |
| Zm00001d047995_P001 | Maize | nucleus | 37.25 | 31.08 |
| Zm00001d044081_P001 | Maize | nucleus | 27.94 | 30.67 |
| Zm00001d036118_P001 | Maize | nucleus | 30.77 | 29.12 |
| Zm00001d045400_P001 | Maize | nucleus | 31.98 | 29.04 |
| Zm00001d005875_P001 | Maize | nucleus | 38.06 | 28.92 |
| Zm00001d020670_P001 | Maize | nucleus | 38.87 | 28.83 |
| Zm00001d045398_P001 | Maize | nucleus | 30.77 | 25.94 |
| Zm00001d007525_P001 | Maize | plasma membrane | 28.74 | 25.72 |
| Zm00001d029934_P001 | Maize | nucleus | 33.2 | 25.55 |
| Zm00001d050834_P001 | Maize | nucleus | 34.01 | 25.38 |
| Zm00001d031745_P001 | Maize | plastid | 38.06 | 21.22 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103626388 | MapMan:15.5.3.1 | UniProt:A0A1D6GUM6 | ProteinID:AQK66674.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF252 | SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI0004DEA704 | EnsemblPlantsGene:Zm00001d014630 | EnsemblPlants:Zm00001d014630_P001 | EnsemblPlants:Zm00001d014630_T001 | SEG:seg | : |
Description
Homeobox-transcription factor 43Homeobox-leucine zipper protein HAT9
Coordinates
chr5:-:56629737..56631089
Molecular Weight (calculated)
26544.4 Da
IEP (calculated)
10.158
GRAVY (calculated)
-0.614
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSTRAMEEE GVGKSWLALG IGGGDLMKRN NRPPVQFDLL FPPQSVKEEG AASKKAEKGG GRKRLKVVTA DEDGRQSPHG GPGPSDGSGA GARKKLRLTN
101: EQSTLLEDTF RAHNILSNAQ KQELARQVDL SARQVEVWFQ NRRARTKLKQ TEVDCEILKR CCESLTGENQ RLRLELAQLQ RSAAAAAEAG LYVQSSFPPL
201: ATATATASVC PSCDKVIAVS SGGETSGKSS TSYSSRRAGF PSIMGSR
101: EQSTLLEDTF RAHNILSNAQ KQELARQVDL SARQVEVWFQ NRRARTKLKQ TEVDCEILKR CCESLTGENQ RLRLELAQLQ RSAAAAAEAG LYVQSSFPPL
201: ATATATASVC PSCDKVIAVS SGGETSGKSS TSYSSRRAGF PSIMGSR
001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
Arabidopsis Description
HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.