Factsheet for Zm00001d028304_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92607	Sorghum	nucleus	88.36	86.29
Zm00001d047995_P001	Maize	nucleus	80.14	79.05
TraesCS4A01G059600.1	Wheat	nucleus	67.47	71.64
TraesCS4D01G236600.1	Wheat	nucleus	66.78	71.17
TraesCS4B01G235300.2	Wheat	nucleus	67.81	70.97
HORVU4Hr1G065900.5	Barley	nucleus	68.15	70.82
Os03t0231150-00	Rice	cytosol, extracellular	24.32	66.36
Zm00001d030191_P001	Maize	nucleus	45.55	50.76
Zm00001d002754_P001	Maize	nucleus	36.3	46.7
Zm00001d038941_P001	Maize	nucleus	12.33	46.15
Zm00001d044081_P001	Maize	nucleus	33.56	43.56
Zm00001d014628_P001	Maize	nucleus	31.16	41.18
Zm00001d045400_P001	Maize	nucleus	35.96	38.6
Zm00001d014630_P001	Maize	nucleus	32.19	38.06
Zm00001d020670_P001	Maize	nucleus	43.15	37.84
Zm00001d036118_P001	Maize	nucleus	33.56	37.55
Zm00001d029934_P001	Maize	nucleus	40.75	37.07
Zm00001d005875_P001	Maize	nucleus	41.1	36.92
Zm00001d045398_P001	Maize	nucleus	36.64	36.52
Zm00001d014629_P001	Maize	nucleus	29.11	36.32
Zm00001d036510_P001	Maize	nucleus	30.14	34.65
Zm00001d050834_P001	Maize	nucleus	34.93	30.82
Zm00001d031745_P001	Maize	plastid	44.86	29.57
Zm00001d000303_P001	Maize	nucleus	26.37	28.62
Zm00001d009802_P001	Maize	nucleus, plastid	16.44	27.27
Zm00001d007525_P001	Maize	plasma membrane	19.52	20.65

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100193486	MapMan:15.5.3.1	UniProt:B4FF66	EMBL:BT035754	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	ProteinID:ONL95400.1	PFAM:PF00046	PFAM:PF02183
ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF271	SMART:SM00340	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI0001A595B8	EnsemblPlantsGene:Zm00001d028304	EnsemblPlants:Zm00001d028304_P001	EnsemblPlants:Zm00001d028304_T001	SEG:seg

Description

Homeobox-transcription factor 45Homeobox-leucine zipper protein HAT3

Coordinates

chr1:-:29830012..29832203

Molecular Weight (calculated)

30965.7 Da

IEP (calculated)

8.710

GRAVY (calculated)

-0.514

Length

292 amino acids

Sequence
(BLAST)

001: MAQEDVHLDD AGLALGLSLG SGSGGASGAA RHGGISRRLS REVRLPSPHP LEPSLTLSLP DEATATGSGG GGAAHSVSSL SVAGVKRERV DDAEGERASS
101: TAALPRACAG AEDDDDDGST RKKLRLTKEQ SALLEDRFKE HSTLNPKQKV ALAKQLKLRP RQVEVWFQNR RARTKLKQTE VDCELLKRCC ESLTEENRRL
201: QRELQELRAL KFAPHPQAPP SSATQAGAAA GVVPAPPPPL YMQMQMPAAA TLSLCPSCDR LAGPGAAAKA EPRPKAAATH HFFNPFTHSA AC

Best Arabidopsis Sequence Match ( AT4G37790.1 )
(BLAST)

001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC

Arabidopsis Description

HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.