Factsheet for TraesCS4B01G235300.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G236600.1	Wheat	nucleus	94.62	96.35
TraesCS4A01G059600.1	Wheat	nucleus	94.62	96.0
HORVU4Hr1G065900.5	Barley	nucleus	92.11	91.46
Os03t0231150-00	Rice	cytosol, extracellular	27.96	72.9
EER92607	Sorghum	nucleus	75.63	70.57
Zm00001d028304_P001	Maize	nucleus	70.97	67.81
Zm00001d047995_P001	Maize	nucleus	69.18	65.2
TraesCS3B01G000100.1	Wheat	nucleus	43.01	52.63
TraesCS2B01G434900.1	Wheat	nucleus	36.92	44.78
TraesCS3B01G260800.1	Wheat	nucleus	35.13	44.14
TraesCS7B01G326300.1	Wheat	nucleus	32.97	41.26
TraesCS6B01G148700.1	Wheat	nucleus	28.32	37.8
TraesCS6B01G148800.1	Wheat	nucleus	28.32	37.8
TraesCS5B01G231300.1	Wheat	nucleus	46.59	36.62
TraesCS1B01G232700.2	Wheat	nucleus	42.29	36.09
TraesCS6B01G149000.1	Wheat	nucleus	26.16	33.18
TraesCS1B01G393100.1	Wheat	nucleus	36.2	33.01

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF271	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	EnsemblPlantsGene:TraesCS4B01G235300
EnsemblPlants:TraesCS4B01G235300.2	TIGR:cd00086	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:+:491464360..491465839

Molecular Weight (calculated)

29876.1 Da

IEP (calculated)

7.507

GRAVY (calculated)

-0.613

Length

279 amino acids

Sequence
(BLAST)

001: MAQEEVHDAG LALGLSLGGG GRGGGDGSSS AHRGNNSSSR LTLWEAAPSL EPSLTLSMPE DTTMTSTASG GVSSMSVGGA VKRERAEEAD LGEMVSSTAA
101: GAEEDDDGST RKKLRLTKEQ SALLEDRFKE HSTLNPKQKV ALAKQLNLRP RQVEVWFQNR RARTKLKQTE VDCEFLKRCC ETLTEENRRL QRELQELRAI
201: KFAPPPPPNN ASQHPGTPSS AAAPPAPFYM QLPAATLTIC PSCERLGGTA ATAAGKVDPD RPKAATHHFF NPFTHSAAC

Best Arabidopsis Sequence Match ( AT4G37790.1 )
(BLAST)

001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC

Arabidopsis Description

HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.