Factsheet for TraesCS6B01G148700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G148800.1	Wheat	nucleus	91.39	91.39
TraesCS6D01G110400.1	Wheat	nucleus	83.25	90.62
TraesCS6A01G120300.1	Wheat	nucleus	82.78	85.22
TraesCS6B01G149000.1	Wheat	nucleus	66.03	62.73
GSMUA_Achr7P15910_001	Banana	nucleus	33.97	46.1
GSMUA_Achr10P...	Banana	nucleus	34.45	39.56
Os02t0149900-00	Rice	nucleus	46.89	39.52
EES04526	Sorghum	nucleus	48.33	39.0
Zm00001d000303_P001	Maize	nucleus	49.76	38.66
TraesCS7B01G326300.1	Wheat	nucleus	40.19	37.67
PGSC0003DMT400096970	Potato	nucleus	33.49	35.35
GSMUA_Achr2P04490_001	Banana	nucleus	37.8	34.65
TraesCS3B01G000100.1	Wheat	nucleus	37.8	34.65
Solyc07g054380.1.1	Tomato	nucleus	33.97	34.3
GSMUA_Achr7P05000_001	Banana	nucleus	30.14	33.87
KRH12370	Soybean	nucleus	35.41	32.74
TraesCS2B01G434900.1	Wheat	nucleus	35.89	32.61
KRH19131	Soybean	nucleus	33.01	32.39
GSMUA_Achr1P10390_001	Banana	nucleus	35.41	31.9
KRH02731	Soybean	nucleus	31.1	31.1
KRH37372	Soybean	nucleus	34.45	30.38
TraesCS3B01G260800.1	Wheat	nucleus	32.06	30.18
TraesCS4B01G235300.2	Wheat	nucleus	37.8	28.32
TraesCS1B01G232700.2	Wheat	nucleus	40.19	25.69
TraesCS5B01G231300.1	Wheat	nucleus	40.67	23.94
TraesCS1B01G393100.1	Wheat	nucleus	33.49	22.88

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PRINTS:PR00031	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF219	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689
EnsemblPlantsGene:TraesCS6B01G148700	EnsemblPlants:TraesCS6B01G148700.1	TIGR:cd00086	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:+:149551263..149551965

Molecular Weight (calculated)

22642.8 Da

IEP (calculated)

9.909

GRAVY (calculated)

-0.619

Length

209 amino acids

Sequence
(BLAST)

001: MSTVTTISST SKESLEVEEL VDTRLSLVIG AGSQPPPAPE AAGHVAGNIG RKNGERWIGG GSARQHGKRA RAVHGGSDID DDDDGGDAVG RARKKLRLTA
101: EQAALLEKSV RAHNVLSHGE KHDLAGQLGL KPRQVEVWFQ NRRARTKLKQ TELDCELLRR WCERLSDDNA RLRRELAETR AVLLVGGAQD LTFTGCPSCN
201: RLAGGRRAA

Best Arabidopsis Sequence Match ( AT4G37790.1 )
(BLAST)

001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC

Arabidopsis Description

HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.