Factsheet for TraesCS6B01G148800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G087400.1	Wheat	nucleus	100.0	100.0
TraesCS6D01G110400.1	Wheat	nucleus	84.21	91.67
TraesCS6B01G148700.1	Wheat	nucleus	91.39	91.39
TraesCS6A01G120300.1	Wheat	nucleus	84.69	87.19
TraesCS6B01G149000.1	Wheat	nucleus	67.46	64.09
GSMUA_Achr7P15910_001	Banana	nucleus	34.93	47.4
Os02t0149900-00	Rice	nucleus	49.28	41.53
GSMUA_Achr10P...	Banana	nucleus	35.41	40.66
EES04526	Sorghum	nucleus	49.28	39.77
Zm00001d000303_P001	Maize	nucleus	50.24	39.03
TraesCS7B01G326300.1	Wheat	nucleus	41.63	39.01
PGSC0003DMT400096970	Potato	nucleus	34.45	36.36
GSMUA_Achr7P05000_001	Banana	nucleus	32.06	36.02
Solyc07g054380.1.1	Tomato	nucleus	34.93	35.27
GSMUA_Achr2P04490_001	Banana	nucleus	38.28	35.09
KRH12370	Soybean	nucleus	37.32	34.51
TraesCS3B01G000100.1	Wheat	nucleus	37.32	34.21
TraesCS2B01G434900.1	Wheat	nucleus	37.32	33.91
KRH19131	Soybean	nucleus	34.45	33.8
KRH37372	Soybean	nucleus	36.36	32.07
KRH02731	Soybean	nucleus	32.06	32.06
TraesCS3B01G260800.1	Wheat	nucleus	33.49	31.53
GSMUA_Achr1P10390_001	Banana	nucleus	34.93	31.47
TraesCS4B01G235300.2	Wheat	nucleus	37.8	28.32
TraesCS1B01G232700.2	Wheat	nucleus	41.15	26.3
TraesCS5B01G231300.1	Wheat	nucleus	39.71	23.38
TraesCS1B01G393100.1	Wheat	nucleus	33.97	23.2

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PRINTS:PR00031	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF219	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689
EnsemblPlantsGene:TraesCS6B01G148800	EnsemblPlants:TraesCS6B01G148800.1	TIGR:cd00086	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:+:149610955..149611671

Molecular Weight (calculated)

22773.9 Da

IEP (calculated)

9.871

GRAVY (calculated)

-0.721

Length

209 amino acids

Sequence
(BLAST)

001: MSSLTTISSA SKESMEVEEL VDTRLSLVIG AGSQPPPVPE EAGHVAGNIG RKKGERWIGG SSTRQHGKRA RAVHGGSDID EDDDGGDAAG RARKKLRLTG
101: EQAALLEKSF RSHNVLSHGE KQDLAGQLGL KPRQVEVWFQ NRRARTKLKQ TELDCELLRR WCERLSDDNA RLRRELAETR AVLLVGGSQD STLTGCPSCN
201: RLAGGRRAA

Best Arabidopsis Sequence Match ( AT2G22800.1 )
(BLAST)

001: MGFDDTCNTG LVLGLGPSPI PNNYNSTIRQ SSVYKLEPSL TLCLSGDPSV TVVTGADQLC RQTSSHSGVS SFSSGRVVKR ERDGGEESPE EEEMTERVIS
101: DYHEDEEGIS ARKKLRLTKQ QSALLEESFK DHSTLNPKQK QVLARQLNLR PRQVEVWFQN RRARTKLKQT EVDCEFLKKC CETLADENIR LQKEIQELKT
201: LKLTQPFYMH MPASTLTKCP SCERIGGGGG GNGGGGGGSG ATAVIVDGST AKGAFSISSK PHFFNPFTNP SAAC

Arabidopsis Description

HAT9HAT9 [Source:UniProtKB/TrEMBL;Acc:A0A178VZE8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.