CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH01102
KRH04366
KRH12426
KRH28314
KRH40151
KRH48783
KRH58171
KRH66562
KRH77172

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06710.1	KRH01102	AT3G60390.1	21798944
AT5G06710.1	KRH40151	AT3G60390.1	21798944
AT5G06710.1	KRH48783	AT3G60390.1	21798944
AT5G06710.1	KRH66562	AT3G60390.1	21798944
AT5G06710.1	KRH12426	AT4G26100.1	21798944
AT5G06710.1	KRH04366	AT4G37790.1	21798944
AT5G06710.1	KRH28314	AT4G37790.1	21798944
AT5G06710.1	KRH58171	AT4G37790.1	21798944
AT5G06710.1	KRH77172	AT4G37790.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0447000-00	Rice	nucleus	25.99	94.44
KRH71831	Soybean	plastid	92.66	92.1
KRH67080	Soybean	nucleus	58.1	65.97
KRG95402	Soybean	nucleus, plastid	58.41	65.41
VIT_08s0007g06670.t01	Wine grape	nucleus	66.06	65.26
GSMUA_Achr3P07740_001	Banana	nucleus	34.56	58.25
KRH43419	Soybean	nucleus	58.1	50.4
GSMUA_Achr7P02380_001	Banana	nucleus	43.43	49.31
AT5G06710.1	Thale cress	nucleus	50.46	49.11
KRH13873	Soybean	nucleus	57.49	48.96
KRH40151	Soybean	nucleus	34.25	48.91
KRH77331	Soybean	nucleus	40.06	48.88
CDX81016	Canola	nucleus	38.84	48.85
KRH50371	Soybean	nucleus	31.5	48.36
Zm00001d020670_P001	Maize	nucleus	48.93	48.05
Bra005907.1-P	Field mustard	nucleus	46.48	47.2
CDX98948	Canola	nucleus	48.93	47.2
KRG89300	Soybean	nucleus	31.5	47.03
Bra009219.1-P	Field mustard	nucleus	48.62	46.76
CDX70076	Canola	nucleus	48.62	46.76
CDY55775	Canola	nucleus	45.57	46.27
GSMUA_Achr9P15710_001	Banana	nucleus	44.04	46.15
KRH57467	Soybean	nucleus	41.9	45.97
KRH28155	Soybean	nucleus	40.06	45.96
GSMUA_Achr8P22800_001	Banana	nucleus	36.7	45.28
KRH04179	Soybean	nucleus	41.28	45.15
KRH12370	Soybean	nucleus	30.89	44.69
KRH28314	Soybean	nucleus	38.53	44.52
TraesCS5D01G235300.1	Wheat	nucleus	45.87	44.25
Zm00001d005875_P001	Maize	nucleus	43.73	44.0
KRH77172	Soybean	nucleus	37.92	43.82
KRH37372	Soybean	nucleus	31.19	43.04
TraesCS5B01G231300.1	Wheat	nucleus	46.18	42.54
EER98990	Sorghum	nucleus	47.71	42.28
KRH19131	Soybean	nucleus	27.52	42.25
TraesCS5A01G232700.1	Wheat	nucleus	45.26	42.17
KRH48783	Soybean	nucleus	40.37	41.64
KRH02731	Soybean	nucleus	26.61	41.63
KRH66562	Soybean	nucleus	38.84	40.97
KRH04366	Soybean	nucleus	38.84	40.71
KRH01102	Soybean	nucleus	36.09	40.69
KRH58171	Soybean	extracellular, nucleus	37.92	40.66
CDX78884	Canola	nucleus	30.89	40.08
KXG25294	Sorghum	nucleus	45.26	38.74
HORVU5Hr1G067010.2	Barley	nucleus	45.87	38.17
KRH15480	Soybean	nucleus	32.42	34.75
KRH61469	Soybean	nucleus	30.58	34.48
KRG88660	Soybean	nucleus	31.5	33.33
Zm00001d031745_P001	Maize	plastid	44.65	32.96

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100776113	MapMan:15.5.3.1	EMBL:ACUP02005609	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G109700
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	UniProt:I1L2K9	InterPro:IPR001356	EnsemblPlants:KRH38083	ProteinID:KRH38083	ProteinID:KRH38083.1
InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326
PANTHER:PTHR24326:SF514	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI00023382F5	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:21479307..21481803

Molecular Weight (calculated)

36193.5 Da

IEP (calculated)

7.990

GRAVY (calculated)

-0.680

Length

327 amino acids

Sequence
(BLAST)

001: MELALSLGDT SKSFTFLDKA VTLPPNKDPP GFCLAPSFAE KRSDSERGTA SGSSDPPVQL DLLPFSPVLR PQQHPPSHLR IPWLTQACGG AARVLDVNLF
101: PAATAEDGDD GTSLSSSPNS AVSPFQMDFC TRNGNAAEFG SRNKREQQEA EGRASDDDEN GSTRKKLRLS KEQSAFLEES FKEHTTLNPK QKLALAKQLN
201: LRPRQVEVWF QNRRARTKLK QTEVDCEYLK RCCETLTEEN RRLQKELQEL RALKSSQPFY MQLPATTLTM CPSCERVATN STTTNQTSIV NNNASSQIPV
301: ELSLSKPRIL PFPNGQVQAQ AHQIASS

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.