Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4A01G382200.1 | Wheat | nucleus | 92.94 | 93.98 |
TraesCS7A01G083800.1 | Wheat | nucleus | 92.19 | 93.23 |
TraesCS7D01G078900.1 | Wheat | nucleus | 72.86 | 70.0 |
Zm00001d045400_P001 | Maize | nucleus | 59.48 | 58.82 |
Zm00001d036118_P001 | Maize | nucleus | 56.88 | 58.62 |
Os06t0140400-01 | Rice | nucleus | 54.28 | 57.03 |
EER87812 | Sorghum | nucleus | 59.48 | 56.14 |
TraesCS7D01G078800.1 | Wheat | nucleus | 56.13 | 50.84 |
TraesCS2D01G412900.1 | Wheat | nucleus | 34.94 | 40.87 |
TraesCS6D01G110400.1 | Wheat | nucleus | 28.62 | 40.1 |
TraesCS3D01G009700.1 | Wheat | nucleus | 33.46 | 39.82 |
TraesCS3D01G221800.1 | Wheat | nucleus | 31.6 | 38.29 |
TraesCS4D01G236600.1 | Wheat | nucleus | 36.06 | 35.4 |
TraesCS6D01G110600.1 | Wheat | nucleus | 27.51 | 32.89 |
TraesCS7D01G417700.1 | Wheat | nucleus | 27.14 | 32.88 |
TraesCS1D01G220900.1 | Wheat | nucleus | 39.78 | 32.82 |
TraesCS1D01G379700.1 | Wheat | nucleus | 36.06 | 31.91 |
TraesCS5D01G235300.1 | Wheat | nucleus | 39.41 | 31.27 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 |
ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF233 | SMART:SM00340 | SMART:SM00389 |
SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS7D01G079000 | EnsemblPlants:TraesCS7D01G079000.1 | TIGR:cd00086 | SEG:seg | : |
Description
No Description!
Coordinates
chr7D:-:46711457..46712351
Molecular Weight (calculated)
28559.7 Da
IEP (calculated)
9.388
GRAVY (calculated)
-0.513
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPQSLDLGL NLGLGLVSQS SQSSFWYSGG NVAADQEVGP TPTAVAVEER RCSPGSPASS GSGSGSGLKR GAERSAGSGD EDQDDDGGNA RKKLRLSKDQ
101: AAVLEECFKT HHTLTPKQKT ALANRLGLRP RQVEVWFQNR RARTKLKQTE VDCEYMKRWC EQLAEQNRRL EKEVAELRAL KAAPPAHNGA STGPLTTLTM
201: CLSCKRVAST SSSSTCNVPS FSANAGIGMP MPSPVALPEQ RQFFCGFRDT GAAAYGGSAG LAKVVKAAR
101: AAVLEECFKT HHTLTPKQKT ALANRLGLRP RQVEVWFQNR RARTKLKQTE VDCEYMKRWC EQLAEQNRRL EKEVAELRAL KAAPPAHNGA STGPLTTLTM
201: CLSCKRVAST SSSSTCNVPS FSANAGIGMP MPSPVALPEQ RQFFCGFRDT GAAAYGGSAG LAKVVKAAR
001: MSERDDGLGL SLSLSLGFNQ KDPSSRLNPM PLASYASSSH MQHMQQSNYN HPQKIQNTWI NMFQSSERNS DMRSFLRGID VNRAPSTVVV DVEDEGAGVS
101: SPNSTVSSVM SGKKSERELM AAAGAVGGGR VEDNEIERAS CSLGGGSDDE DGSGNGDDSS RKKLRLSKEQ ALVLEETFKE HSTLNPKQKM ALAKQLNLRT
201: RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ENLTDENRRL QKEVSELRAL KLSPHLYMHM KPPTTLTMCP SCERVAVTSS SSSVAPPVMN SSSPMGPMSP
301: WAAMPLRQRP AAGSH
101: SPNSTVSSVM SGKKSERELM AAAGAVGGGR VEDNEIERAS CSLGGGSDDE DGSGNGDDSS RKKLRLSKEQ ALVLEETFKE HSTLNPKQKM ALAKQLNLRT
201: RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ENLTDENRRL QKEVSELRAL KLSPHLYMHM KPPTTLTMCP SCERVAVTSS SSSVAPPVMN SSSPMGPMSP
301: WAAMPLRQRP AAGSH
Arabidopsis Description
HAT3Homeobox-leucine zipper protein HAT3 [Source:UniProtKB/Swiss-Prot;Acc:P46602]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.