CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045400_P001	Maize	nucleus	87.02	91.18
Zm00001d036118_P001	Maize	nucleus	80.7	88.12
Os06t0140400-01	Rice	nucleus	61.75	68.75
TraesCS7A01G083800.1	Wheat	nucleus	56.49	60.53
TraesCS4A01G382200.1	Wheat	nucleus	56.14	60.15
TraesCS7D01G079000.1	Wheat	nucleus	56.14	59.48
EER87813	Sorghum	plastid	50.88	45.6
EES12613	Sorghum	nucleus	35.44	43.35
EER91838	Sorghum	nucleus	35.79	40.16
EES03343	Sorghum	nucleus	31.58	39.13
EER92607	Sorghum	nucleus	36.49	34.78
EER90307	Sorghum	nucleus	27.37	33.05
EER98990	Sorghum	nucleus	41.75	32.25
EER94486	Sorghum	nucleus	37.89	31.21
OQU85171	Sorghum	nucleus	34.39	30.34
KXG25294	Sorghum	nucleus	40.35	30.1
EES04526	Sorghum	nucleus	24.56	27.03

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:8068427	UniProt:C5Z3S6	ncoils:Coil	EnsemblPlants:EER87812
ProteinID:EER87812	ProteinID:EER87812.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo
PFAM:PF00046	PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326
PANTHER:PTHR24326:SF233	SMART:SM00340	SMART:SM00389	EnsemblPlantsGene:SORBI_3010G030100	SUPFAM:SSF46689	UniParc:UPI0001A88F10
RefSeq:XP_002436445.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:2443617..2445280

Molecular Weight (calculated)

29328.4 Da

IEP (calculated)

9.716

GRAVY (calculated)

-0.304

Length

285 amino acids

Sequence
(BLAST)

001: MAPQSLDLGL SLGLGVAAFQ PSLSFCHPAA GNAAAVAGAA ERDASPATAE ERERRCSPAG SPVSSGSGSG SGKRAAAERS AGSGDEDDDG AARKKLRLSK
101: DQAAVLEECF KTHHTLTPKQ KVALASSLGL RPRQVEVWFQ NRRARTKLKQ TEVDCEYLKR WCEQLAEENR RLGKEVAELR ALSAAPAPAA PLTTLTMCLS
201: CRRVASSSSP SSANTSSPNN IPAAHPHAHA AAAASNGGSM ASSPAAAATL PAHRQFFCGF RDAGAAAAAV YGVSSGLAKA VRAAR

Best Arabidopsis Sequence Match ( AT3G60390.1 )
(BLAST)

001: MSERDDGLGL SLSLSLGFNQ KDPSSRLNPM PLASYASSSH MQHMQQSNYN HPQKIQNTWI NMFQSSERNS DMRSFLRGID VNRAPSTVVV DVEDEGAGVS
101: SPNSTVSSVM SGKKSERELM AAAGAVGGGR VEDNEIERAS CSLGGGSDDE DGSGNGDDSS RKKLRLSKEQ ALVLEETFKE HSTLNPKQKM ALAKQLNLRT
201: RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ENLTDENRRL QKEVSELRAL KLSPHLYMHM KPPTTLTMCP SCERVAVTSS SSSVAPPVMN SSSPMGPMSP
301: WAAMPLRQRP AAGSH

Arabidopsis Description

HAT3Homeobox-leucine zipper protein HAT3 [Source:UniProtKB/Swiss-Prot;Acc:P46602]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.