Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P01670_001 | Banana | nucleus | 75.99 | 71.38 |
| GSMUA_Achr11P... | Banana | nucleus | 55.56 | 62.75 |
| KRH77331 | Soybean | nucleus | 59.86 | 62.31 |
| GSMUA_Achr2P10040_001 | Banana | nucleus | 63.8 | 60.96 |
| PGSC0003DMT400067540 | Potato | nucleus | 59.5 | 60.36 |
| VIT_00s0299g00100.t01 | Wine grape | nucleus | 64.16 | 60.27 |
| GSMUA_Achr7P06950_001 | Banana | nucleus | 39.07 | 60.22 |
| Solyc08g078300.2.1 | Tomato | nucleus | 59.86 | 59.64 |
| KRH57467 | Soybean | nucleus | 63.08 | 59.06 |
| KRH28155 | Soybean | nucleus | 60.22 | 58.95 |
| KRH04179 | Soybean | nucleus | 61.65 | 57.53 |
| Solyc08g007270.2.1 | Tomato | nucleus | 55.91 | 56.73 |
| AT4G16780.1 | Thale cress | nucleus | 57.35 | 56.34 |
| GSMUA_Achr4P21600_001 | Banana | nucleus | 55.91 | 56.32 |
| Bra040094.1-P | Field mustard | nucleus | 56.27 | 55.09 |
| PGSC0003DMT400032546 | Potato | nucleus | 55.2 | 55.0 |
| GSMUA_Achr4P06480_001 | Banana | nucleus | 31.9 | 53.61 |
| Solyc06g060830.2.1 | Tomato | nucleus | 55.56 | 52.01 |
| GSMUA_Achr1P04360_001 | Banana | nucleus | 55.91 | 51.66 |
| GSMUA_Achr3P07740_001 | Banana | nucleus | 35.48 | 51.03 |
| PGSC0003DMT400062081 | Potato | nucleus | 55.56 | 50.82 |
| GSMUA_Achr3P15190_001 | Banana | nucleus | 39.07 | 45.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.84 | 45.87 |
| GSMUA_Achr7P15910_001 | Banana | nucleus | 24.73 | 44.81 |
| GSMUA_Achr4P01350_001 | Banana | nucleus | 39.07 | 42.75 |
| GSMUA_Achr4P13440_001 | Banana | nucleus | 34.77 | 42.73 |
| GSMUA_AchrUn_... | Banana | plastid | 47.67 | 42.63 |
| GSMUA_Achr7P27530_001 | Banana | nucleus | 38.71 | 42.02 |
| GSMUA_Achr7P02380_001 | Banana | nucleus | 43.37 | 42.01 |
| GSMUA_Achr9P09800_001 | Banana | nucleus | 35.84 | 41.49 |
| GSMUA_Achr8P26480_001 | Banana | nucleus | 41.58 | 41.28 |
| GSMUA_Achr10P... | Banana | nucleus | 26.88 | 41.21 |
| GSMUA_Achr8P22800_001 | Banana | nucleus | 39.07 | 41.13 |
| GSMUA_Achr7P05000_001 | Banana | nucleus | 27.24 | 40.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.78 | 40.22 |
| GSMUA_Achr6P30180_001 | Banana | nucleus | 35.13 | 38.89 |
| GSMUA_Achr9P26300_001 | Banana | nucleus | 35.84 | 38.76 |
| GSMUA_Achr8P05100_001 | Banana | nucleus | 39.43 | 38.73 |
| GSMUA_Achr9P15710_001 | Banana | nucleus | 41.94 | 37.5 |
| GSMUA_Achr2P04490_001 | Banana | nucleus | 30.47 | 37.28 |
| GSMUA_Achr6P31710_001 | Banana | nucleus | 37.28 | 36.36 |
| GSMUA_Achr1P10390_001 | Banana | nucleus | 30.11 | 36.21 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr5G13530_001 | EnsemblPlants:GSMUA_Achr5P13530_001 | EnsemblPlants:GSMUA_Achr5T13530_001 | InterPro:HD-ZIP_N | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0SY82 | PFAM:PF00046 |
| PFAM:PF02183 | PFAM:PF04618 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF514 |
| SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000296162A | SEG:seg | : |
Description
Homeobox-leucine zipper protein HAT4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G13530_001]
Coordinates
chr5:-:9725168..9726255
Molecular Weight (calculated)
30683.1 Da
IEP (calculated)
8.701
GRAVY (calculated)
-0.816
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLEKEDLAL SLSLSSSANR FDRLGLVPSS SSSPSRSLPS SCQQWSRLLL ARSAGEARRG LRTIDVNQPP PAGAAAGRPD SEEADASSPN SGVSSVGGKR
101: PAEREAEHDA EPSCSRGASD EEEGDGDGSR KKLRLSKDQS AVLEESFKEH TTLSPKQKLA LAKQLNLRPR QVEVWFQNRR ARTKLKQTEV DCEFLKRCCE
201: NLTEENRRLQ KEVQELRALK LSPQLYMQMT PPTTLTMCPS CERVSKPSFS TTSTTNPPPS EAAAPRSLRP PFLDAPPQR
101: PAEREAEHDA EPSCSRGASD EEEGDGDGSR KKLRLSKDQS AVLEESFKEH TTLSPKQKLA LAKQLNLRPR QVEVWFQNRR ARTKLKQTEV DCEFLKRCCE
201: NLTEENRRLQ KEVQELRALK LSPQLYMQMT PPTTLTMCPS CERVSKPSFS TTSTTNPPPS EAAAPRSLRP PFLDAPPQR
001: MMFEKDDLGL SLGLNFPKKQ INLKSNPSVS VTPSSSSFGL FRRSSWNESF TSSVPNSDSS QKETRTFIRG IDVNRPPSTA EYGDEDAGVS SPNSTVSSST
101: GKRSEREEDT DPQGSRGISD DEDGDNSRKK LRLSKDQSAI LEETFKDHST LNPKQKQALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC EFLRRCCENL
201: TEENRRLQKE VTELRALKLS PQFYMHMSPP TTLTMCPSCE HVSVPPPQPQ AATSAHHRSL PVNAWAPATR ISHGLTFDAL RPRS
101: GKRSEREEDT DPQGSRGISD DEDGDNSRKK LRLSKDQSAI LEETFKDHST LNPKQKQALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC EFLRRCCENL
201: TEENRRLQKE VTELRALKLS PQFYMHMSPP TTLTMCPSCE HVSVPPPQPQ AATSAHHRSL PVNAWAPATR ISHGLTFDAL RPRS
Arabidopsis Description
HAT4Homeobox-leucine zipper protein HAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q05466]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.