Factsheet for AT4G16780.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040094.1-P	Field mustard	nucleus	92.96	92.63
KRH77331	Soybean	nucleus	64.44	68.28
KRH28155	Soybean	nucleus	66.9	66.67
VIT_00s0299g00100.t01	Wine grape	nucleus	67.96	64.98
KRH57467	Soybean	nucleus	66.55	63.42
KRH04179	Soybean	nucleus	65.49	62.21
GSMUA_Achr11P...	Banana	nucleus	52.11	59.92
Solyc06g060830.2.1	Tomato	nucleus	61.27	58.39
GSMUA_Achr5P13530_001	Banana	nucleus	56.34	57.35
AT5G47370.1	Thale cress	nucleus	55.63	55.83
GSMUA_Achr7P06950_001	Banana	nucleus	35.21	55.25
GSMUA_Achr2P10040_001	Banana	nucleus	56.69	55.14
PGSC0003DMT400062081	Potato	nucleus	59.15	55.08
AT4G17460.1	Thale cress	nucleus	53.52	53.9
GSMUA_Achr4P21600_001	Banana	nucleus	52.46	53.79
GSMUA_Achr1P01670_001	Banana	nucleus	55.28	52.86
AT3G60390.1	Thale cress	nucleus	58.45	52.7
HORVU2Hr1G097940.2	Barley	nucleus	41.55	52.44
TraesCS2A01G415900.1	Wheat	nucleus	41.2	51.54
Zm00001d002754_P001	Maize	nucleus	41.2	51.54
TraesCS2B01G434900.1	Wheat	nucleus	41.2	50.87
TraesCS2D01G412900.1	Wheat	nucleus	40.85	50.43
AT2G44910.1	Thale cress	nucleus	54.93	49.06
EES12613	Sorghum	nucleus	40.14	48.93
GSMUA_Achr1P04360_001	Banana	nucleus	51.06	48.01
Os04t0548700-01	Rice	nucleus	40.14	46.15
AT4G37790.1	Thale cress	nucleus	41.2	42.09
TraesCS1B01G232700.2	Wheat	nucleus	47.54	41.28
TraesCS1D01G220900.1	Wheat	nucleus	47.18	41.1
AT1G70920.1	Thale cress	nucleus	29.58	40.78
GSMUA_AchrUn_...	Banana	plastid	44.72	40.71
AT2G22800.1	Thale cress	nucleus	39.08	40.51
TraesCS1A01G219200.1	Wheat	nucleus	46.83	40.43
Zm00001d029934_P001	Maize	nucleus	44.72	39.56
Os10t0561800-01	Rice	nucleus	43.31	39.55
AT5G06710.1	Thale cress	nucleus	45.77	38.69
EER94486	Sorghum	nucleus	46.13	37.86
HORVU1Hr1G055930.1	Barley	nucleus	46.13	36.29
AT2G01430.1	Thale cress	plasma membrane	31.34	32.36

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:827384	ProteinID:AAO19435.1	ProteinID:AAO19436.1	ProteinID:AAO19437.1
ProteinID:AAO19438.1	ProteinID:ABP96504.1	ProteinID:ABP96505.1	ProteinID:ABP96506.1	ProteinID:ABP96507.1	ProteinID:ABP96508.1
ProteinID:ABP96509.1	ProteinID:ABP96510.1	ProteinID:ABP96511.1	ProteinID:ABP96512.1	ProteinID:ABP96513.1	ProteinID:ABP96514.1
ProteinID:ABP96515.1	ProteinID:ABP96516.1	ProteinID:ABP96517.1	ProteinID:ABP96518.1	ProteinID:AEE83803.1	EMBL:AF375453
ArrayExpress:AT4G16780	EnsemblPlantsGene:AT4G16780	RefSeq:AT4G16780	TAIR:AT4G16780	RefSeq:AT4G16780-TAIR-G	EnsemblPlants:AT4G16780.1
TAIR:AT4G16780.1	Symbol:ATHB-2	EMBL:AY081747	ProteinID:CAA48248.1	ProteinID:CAA79670.1	ProteinID:CAB10452.1
ProteinID:CAB78720.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008283	GO:GO:0009058	GO:GO:0009585	GO:GO:0009605
GO:GO:0009628	GO:GO:0009641	GO:GO:0009653	GO:GO:0009719	GO:GO:0009733	GO:GO:0009735
GO:GO:0009826	GO:GO:0009987	GO:GO:0010016	GO:GO:0010017	GO:GO:0010218	GO:GO:0016043
GO:GO:0016049	GO:GO:0040007	GO:GO:0042803	GO:GO:0043565	GO:GO:0045892	GO:GO:0048364
InterPro:HD-ZIP_N	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:Leu_zip_homeo	EMBL:M90394	RefSeq:NP_193411.1	PFAM:PF00046	PFAM:PF02183	PFAM:PF04618
PO:PO:0000013	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0009005	PO:PO:0009025
PO:PO:0009030	PO:PO:0009046	PO:PO:0009047	PO:PO:0020137	PO:PO:0025022	PRINTS:PR00031
ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF210	UniProt:Q05466	SMART:SM00340
SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000012C0B3	EMBL:X68145	SEG:seg	:

Description

HAT4Homeobox-leucine zipper protein HAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q05466]

Coordinates

chr4:+:9449114..9450905

Molecular Weight (calculated)

31854.2 Da

IEP (calculated)

9.024

GRAVY (calculated)

-0.873

Length

284 amino acids

Sequence
(BLAST)

001: MMFEKDDLGL SLGLNFPKKQ INLKSNPSVS VTPSSSSFGL FRRSSWNESF TSSVPNSDSS QKETRTFIRG IDVNRPPSTA EYGDEDAGVS SPNSTVSSST
101: GKRSEREEDT DPQGSRGISD DEDGDNSRKK LRLSKDQSAI LEETFKDHST LNPKQKQALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC EFLRRCCENL
201: TEENRRLQKE VTELRALKLS PQFYMHMSPP TTLTMCPSCE HVSVPPPQPQ AATSAHHRSL PVNAWAPATR ISHGLTFDAL RPRS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.