Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72758 | Canola | nucleus | 83.01 | 81.82 |
| Bra016174.1-P | Field mustard | nucleus | 83.01 | 81.82 |
| CDX96287 | Canola | nucleus | 71.36 | 81.22 |
| CDY03710 | Canola | nucleus | 79.13 | 79.51 |
| Bra007952.1-P | Field mustard | nucleus | 79.13 | 79.51 |
| GSMUA_Achr4P06480_001 | Banana | nucleus | 45.63 | 56.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.88 | 50.92 |
| Zm00001d044081_P001 | Maize | nucleus | 53.4 | 48.89 |
| TraesCS3A01G231600.1 | Wheat | nucleus | 52.43 | 48.65 |
| TraesCS3D01G221800.1 | Wheat | nucleus | 52.43 | 48.65 |
| TraesCS3B01G260800.1 | Wheat | nucleus | 51.94 | 48.2 |
| GSMUA_Achr4P13440_001 | Banana | nucleus | 52.91 | 48.02 |
| Os01t0643600-00 | Rice | nucleus | 52.91 | 47.6 |
| EES03343 | Sorghum | nucleus | 51.94 | 46.52 |
| AT2G01430.1 | Thale cress | plasma membrane | 50.97 | 38.18 |
| AT4G17460.1 | Thale cress | nucleus | 40.78 | 29.79 |
| AT5G47370.1 | Thale cress | nucleus | 40.78 | 29.68 |
| AT4G16780.1 | Thale cress | nucleus | 40.78 | 29.58 |
| AT2G22800.1 | Thale cress | nucleus | 38.35 | 28.83 |
| AT4G37790.1 | Thale cress | nucleus | 38.84 | 28.78 |
| AT3G60390.1 | Thale cress | nucleus | 40.78 | 26.67 |
| AT2G44910.1 | Thale cress | nucleus | 39.81 | 25.79 |
| AT5G06710.1 | Thale cress | nucleus | 41.75 | 25.6 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:843431 | UniProt:A9Z1E8 | EMBL:AC008148 | ProteinID:AEE35139.1 |
| EMBL:AK118149 | EMBL:AK175837 | EMBL:AK175965 | ArrayExpress:AT1G70920 | EnsemblPlantsGene:AT1G70920 | RefSeq:AT1G70920 |
| TAIR:AT1G70920 | RefSeq:AT1G70920-TAIR-G | EnsemblPlants:AT1G70920.1 | TAIR:AT1G70920.1 | Symbol:ATHB18 | Unigene:At.35255 |
| EMBL:BT005594 | ncoils:Coil | EMBL:EU339186 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | RefSeq:NP_177248.3 | PFAM:PF00046 | PFAM:PF02183 |
| PO:PO:0000293 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009046 | PO:PO:0020100 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF114 | UniProt:Q8GXM7 | SMART:SM00340 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI000000C6C1 | SEG:seg | : | : | : |
Description
ATHB-XHomeobox-leucine zipper protein ATHB-X [Source:UniProtKB/Swiss-Prot;Acc:Q8GXM7]
Coordinates
chr1:+:26735894..26738665
Molecular Weight (calculated)
23520.8 Da
IEP (calculated)
8.664
GRAVY (calculated)
-0.819
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSPNSSSL DLTISIPSFS PSPSLGDHHG MRDFDINQTP KTEEDREWMI GATPHVNEDD SNSGGRRRKK LRLTKEQSHL LEESFIQNHT LTPKQKKDLA
101: TFLKLSQRQV EVWFQNRRAR SKLKHTEMEC EYLKRWFGSL KEQNRRLQIE VEELRALKPS STSALTMCPR CERVTDAVDN DSNAVQEGAV LSSRSRMTIS
201: SSSSLC
101: TFLKLSQRQV EVWFQNRRAR SKLKHTEMEC EYLKRWFGSL KEQNRRLQIE VEELRALKPS STSALTMCPR CERVTDAVDN DSNAVQEGAV LSSRSRMTIS
201: SSSSLC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.