Factsheet for AT5G47370.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024948.1-P	Field mustard	nucleus	88.69	90.94
CDY64679	Canola	nucleus	88.69	90.94
CDX77762	Canola	nucleus	86.57	89.42
Bra017489.1-P	Field mustard	nucleus	85.16	89.26
CDY25971	Canola	nucleus	77.74	88.0
CDY41046	Canola	nucleus	55.48	83.07
AT4G17460.1	Thale cress	nucleus	77.74	78.01
AT4G16780.1	Thale cress	nucleus	55.83	55.63
VIT_15s0021g01880.t01	Wine grape	nucleus	55.48	55.09
AT3G60390.1	Thale cress	nucleus	52.3	46.98
AT2G44910.1	Thale cress	nucleus	50.88	45.28
AT4G37790.1	Thale cress	nucleus	40.28	41.01
AT2G22800.1	Thale cress	nucleus	39.58	40.88
AT1G70920.1	Thale cress	nucleus	29.68	40.78
AT5G06710.1	Thale cress	nucleus	46.64	39.29
AT2G01430.1	Thale cress	plasma membrane	31.8	32.73

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:834784	EMBL:AB067629	ProteinID:AED95503.1	EMBL:AF428450
EMBL:AJ431183	ArrayExpress:AT5G47370	EnsemblPlantsGene:AT5G47370	RefSeq:AT5G47370	TAIR:AT5G47370	RefSeq:AT5G47370-TAIR-G
EnsemblPlants:AT5G47370.1	TAIR:AT5G47370.1	EMBL:AY052324	EMBL:AY061904	Unigene:At.25127	ProteinID:BAA97171.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009641	GO:GO:0009653	GO:GO:0009719	GO:GO:0009733
GO:GO:0009734	GO:GO:0009826	GO:GO:0009987	GO:GO:0016043	GO:GO:0016049	GO:GO:0040007
GO:GO:0043565	GO:GO:0045892	Symbol:HAT2	InterPro:HD-ZIP_N	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	RefSeq:NP_199548.1	UniProt:P46601	PFAM:PF00046
PFAM:PF02183	PFAM:PF04618	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF514	SMART:SM00340
SMART:SM00389	SUPFAM:SSF46689	EMBL:U09335	UniParc:UPI0000000D47	SEG:seg	:

Description

HAT2Homeobox-leucine zipper protein HAT2 [Source:UniProtKB/Swiss-Prot;Acc:P46601]

Coordinates

chr5:-:19216271..19218007

Molecular Weight (calculated)

31729.2 Da

IEP (calculated)

7.869

GRAVY (calculated)

-0.863

Length

283 amino acids

Sequence
(BLAST)

001: MMMGKEDLGL SLSLGFSQNH NPLQMNLNPN SSLSNNLQRL PWNQTFDPTS DLRKIDVNSF PSTVNCEEDT GVSSPNSTIS STISGKRSER EGISGTGVGS
101: GDDHDEITPD RGYSRGTSDE EEDGGETSRK KLRLSKDQSA FLEETFKEHN TLNPKQKLAL AKKLNLTARQ VEVWFQNRRA RTKLKQTEVD CEYLKRCVEK
201: LTEENRRLQK EAMELRTLKL SPQFYGQMTP PTTLIMCPSC ERVGGPSSSN HHHNHRPVSI NPWVACAGQV AHGLNFEALR PRS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.