Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64220 | Canola | nucleus | 75.54 | 87.14 |
| CDX69330 | Canola | nucleus | 88.13 | 86.88 |
| CDY67919 | Canola | nucleus | 87.77 | 86.52 |
| Bra011786.1-P | Field mustard | nucleus | 87.77 | 86.52 |
| Bra017853.1-P | Field mustard | nucleus | 87.05 | 86.12 |
| Bra010612.1-P | Field mustard | nucleus | 82.73 | 85.19 |
| CDY60301 | Canola | nucleus | 82.37 | 84.81 |
| AT2G22800.1 | Thale cress | nucleus | 73.74 | 74.82 |
| PGSC0003DMT400055199 | Potato | nucleus | 56.83 | 59.4 |
| Solyc02g091930.2.1 | Tomato | nucleus | 56.47 | 58.58 |
| KRH28314 | Soybean | nucleus | 57.19 | 56.18 |
| Solyc02g063520.2.1 | Tomato | nucleus | 50.72 | 55.95 |
| PGSC0003DMT400026968 | Potato | nucleus | 51.08 | 55.91 |
| VIT_00s0732g00010.t01 | Wine grape | nucleus | 56.83 | 55.83 |
| KRH77172 | Soybean | nucleus | 56.47 | 55.48 |
| KRH04366 | Soybean | nucleus | 56.47 | 50.32 |
| KRH58171 | Soybean | extracellular, nucleus | 53.96 | 49.18 |
| AT4G16780.1 | Thale cress | nucleus | 42.09 | 41.2 |
| AT5G47370.1 | Thale cress | nucleus | 41.01 | 40.28 |
| AT4G17460.1 | Thale cress | nucleus | 39.57 | 39.01 |
| AT1G70920.1 | Thale cress | nucleus | 28.78 | 38.84 |
| AT3G60390.1 | Thale cress | nucleus | 42.81 | 37.78 |
| AT5G06710.1 | Thale cress | nucleus | 44.24 | 36.61 |
| AT2G44910.1 | Thale cress | nucleus | 40.65 | 35.53 |
| AT2G01430.1 | Thale cress | plasma membrane | 29.14 | 29.45 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:829935 | ProteinID:AAA56903.1 | ProteinID:AEE86838.1 | EMBL:AJ441254 |
| ArrayExpress:AT4G37790 | EnsemblPlantsGene:AT4G37790 | RefSeq:AT4G37790 | TAIR:AT4G37790 | RefSeq:AT4G37790-TAIR-G | EnsemblPlants:AT4G37790.1 |
| TAIR:AT4G37790.1 | EMBL:AY087563 | EMBL:BT002318 | ProteinID:CAB38927.1 | ProteinID:CAB80444.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009737 |
| GO:GO:0009738 | GO:GO:0009987 | GO:GO:0043565 | Symbol:HAT22 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | EMBL:M90417 | RefSeq:NP_195493.1 | UniProt:P46604 |
| PFAM:PF00046 | PFAM:PF02183 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF521 |
| SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 | EMBL:U09336 | UniParc:UPI0000001123 | SEG:seg |
Description
HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
Coordinates
chr4:+:17768042..17769676
Molecular Weight (calculated)
30731.3 Da
IEP (calculated)
8.151
GRAVY (calculated)
-0.683
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.