Factsheet for AT2G01430.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40379	Canola	nucleus	64.0	89.8
CDY63827	Canola	nucleus	63.27	88.78
Bra026666.1-P	Field mustard	nucleus	49.45	87.18
KRH50371	Soybean	nucleus	48.36	62.44
KRG89300	Soybean	nucleus	48.73	61.19
GSMUA_Achr4P06480_001	Banana	nucleus	36.73	60.84
Solyc05g008050.1.1	Tomato	nucleus	44.0	57.89
VIT_01s0011g04870.t01	Wine grape	nucleus	47.27	57.78
PGSC0003DMT400078329	Potato	nucleus	44.0	56.28
GSMUA_AchrUn_...	Banana	nucleus	44.36	55.96
TraesCS3B01G260800.1	Wheat	nucleus	44.0	54.5
TraesCS3A01G231600.1	Wheat	nucleus	44.0	54.5
TraesCS3D01G221800.1	Wheat	nucleus	43.64	54.05
Zm00001d044081_P001	Maize	nucleus	44.0	53.78
GSMUA_Achr4P13440_001	Banana	nucleus	44.0	53.3
Os01t0643600-00	Rice	nucleus	44.0	52.84
EES03343	Sorghum	nucleus	43.27	51.74
AT1G70920.1	Thale cress	nucleus	38.18	50.97
AT4G17460.1	Thale cress	nucleus	33.82	32.98
AT5G47370.1	Thale cress	nucleus	32.73	31.8
AT4G16780.1	Thale cress	nucleus	32.36	31.34
AT4G37790.1	Thale cress	nucleus	29.45	29.14
AT3G60390.1	Thale cress	nucleus	33.09	28.89
AT2G22800.1	Thale cress	nucleus	28.73	28.83
AT5G06710.1	Thale cress	nucleus	34.91	28.57
AT2G44910.1	Thale cress	nucleus	32.73	28.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:814671	ProteinID:AAC67320.1	ProteinID:AEC05450.1	EMBL:AJ431181
ArrayExpress:AT2G01430	EnsemblPlantsGene:AT2G01430	RefSeq:AT2G01430	TAIR:AT2G01430	RefSeq:AT2G01430-TAIR-G	EnsemblPlants:AT2G01430.1
TAIR:AT2G01430.1	Symbol:ATHB17	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	RefSeq:NP_178252.2	PFAM:PF00046
PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF114	UniProt:Q8S9N6
SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI00000A8ED8	:	:

Description

ATHB-17Homeobox-leucine zipper protein ATHB-17 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9N6]

Coordinates

chr2:-:187608..190369

Molecular Weight (calculated)

31691.3 Da

IEP (calculated)

9.481

GRAVY (calculated)

-0.502

Length

275 amino acids

Sequence
(BLAST)

001: MIKLLFTYIC TYTYKLYALY HMDYACVCMY KYKGIVTLQV CLFYIKLRVF LSNFTFSSSI LALKNPNNSL IKIMAILPEN SSNLDLTISV PGFSSSPLSD
101: EGSGGGRDQL RLDMNRLPSS EDGDDEEFSH DDGSAPPRKK LRLTREQSRL LEDSFRQNHT LNPKQKEVLA KHLMLRPRQI EVWFQNRRAR SKLKQTEMEC
201: EYLKRWFGSL TEENHRLHRE VEELRAMKVG PTTVNSASSL TMCPRCERVT PAASPSRAVV PVPAKKTFPP QERDR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.