Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40379 | Canola | nucleus | 98.98 | 98.98 |
| Bra026666.1-P | Field mustard | nucleus | 77.04 | 96.79 |
| CDY17676 | Canola | nucleus | 90.82 | 90.36 |
| CDX77824 | Canola | nucleus | 90.82 | 89.0 |
| CDY41083 | Canola | nucleus | 54.59 | 82.95 |
| AT2G01430.1 | Thale cress | plasma membrane | 88.78 | 63.27 |
| KRH50371 | Soybean | nucleus | 65.82 | 60.56 |
| GSMUA_Achr4P06480_001 | Banana | nucleus | 50.51 | 59.64 |
| KRG89300 | Soybean | nucleus | 66.33 | 59.36 |
| VIT_01s0011g04870.t01 | Wine grape | nucleus | 66.84 | 58.22 |
| Solyc05g008050.1.1 | Tomato | nucleus | 60.71 | 56.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 60.71 | 54.59 |
| PGSC0003DMT400078329 | Potato | nucleus | 59.69 | 54.42 |
| TraesCS3B01G260800.1 | Wheat | nucleus | 59.69 | 52.7 |
| TraesCS3A01G231600.1 | Wheat | nucleus | 59.69 | 52.7 |
| Zm00001d044081_P001 | Maize | nucleus | 60.2 | 52.44 |
| TraesCS3D01G221800.1 | Wheat | nucleus | 59.18 | 52.25 |
| GSMUA_Achr4P13440_001 | Banana | nucleus | 60.2 | 51.98 |
| Os01t0643600-00 | Rice | nucleus | 60.2 | 51.53 |
| EES03343 | Sorghum | nucleus | 59.69 | 50.87 |
| CDX72758 | Canola | nucleus | 52.55 | 49.28 |
| CDY03710 | Canola | nucleus | 50.51 | 48.29 |
| CDX96287 | Canola | nucleus | 44.39 | 48.07 |
| CDY41046 | Canola | nucleus | 35.71 | 37.04 |
| CDY25971 | Canola | nucleus | 42.35 | 33.2 |
| CDX71814 | Canola | nucleus | 47.45 | 32.63 |
| CDY67061 | Canola | nucleus | 45.41 | 32.36 |
| CDX81016 | Canola | nucleus | 42.86 | 32.31 |
| CDY70444 | Canola | nucleus | 44.9 | 32.0 |
| CDY41168 | Canola | nucleus | 47.45 | 31.53 |
| CDY09626 | Canola | nucleus | 44.9 | 31.32 |
| CDX90473 | Canola | nucleus | 43.88 | 30.82 |
| CDY64679 | Canola | nucleus | 43.37 | 30.8 |
| CDX77762 | Canola | nucleus | 42.86 | 30.66 |
| CDX74693 | Canola | nucleus | 45.92 | 30.51 |
| CDY37015 | Canola | nucleus | 46.94 | 28.66 |
| CDY64220 | Canola | nucleus | 35.2 | 28.63 |
| CDY27404 | Canola | nucleus | 46.43 | 28.53 |
| CDY67919 | Canola | nucleus | 40.31 | 28.01 |
| CDX69330 | Canola | nucleus | 40.31 | 28.01 |
| CDY55775 | Canola | nucleus | 45.41 | 27.64 |
| CDX70076 | Canola | nucleus | 47.45 | 27.35 |
| CDX98948 | Canola | nucleus | 46.94 | 27.14 |
| CDY60301 | Canola | nucleus | 37.24 | 27.04 |
| CDX78884 | Canola | nucleus | 28.57 | 22.22 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078JFI9 | UniProt:A0A078JFI9 | EnsemblPlants:CDY63827 | ProteinID:CDY63827 |
| ProteinID:CDY63827.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00039661001 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | PFAM:PF00046 |
| PFAM:PF02183 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF114 | SMART:SM00340 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EBC309 | SEG:seg | : | : |
Description
BnaC02g47650DBnaC02g47650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFI9]
Coordinates
chrLK034356:-:17195..19683
Molecular Weight (calculated)
22249.5 Da
IEP (calculated)
9.966
GRAVY (calculated)
-0.880
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MAILPENSSN LDLTISVPGF SSSPPSDEGS GGGREQLKLD MNRLPSSEDD DELSHGGSAP PRKKLRLTRE QSRLLEDSFR QNHTLNPKQK EALAKHLMLR
101: PRQIEVWFQN RRARSKLKQT EMECEYFKRW FGSLTEQNHR LHREVEELRA MKVAPSTVTS TSSLTMCPRC ERVTTAASPS MAAPAKKALP LKEREH
101: PRQIEVWFQN RRARSKLKQT EMECEYFKRW FGSLTEQNHR LHREVEELRA MKVAPSTVTS TSSLTMCPRC ERVTTAASPS MAAPAKKALP LKEREH
001: MIKLLFTYIC TYTYKLYALY HMDYACVCMY KYKGIVTLQV CLFYIKLRVF LSNFTFSSSI LALKNPNNSL IKIMAILPEN SSNLDLTISV PGFSSSPLSD
101: EGSGGGRDQL RLDMNRLPSS EDGDDEEFSH DDGSAPPRKK LRLTREQSRL LEDSFRQNHT LNPKQKEVLA KHLMLRPRQI EVWFQNRRAR SKLKQTEMEC
201: EYLKRWFGSL TEENHRLHRE VEELRAMKVG PTTVNSASSL TMCPRCERVT PAASPSRAVV PVPAKKTFPP QERDR
101: EGSGGGRDQL RLDMNRLPSS EDGDDEEFSH DDGSAPPRKK LRLTREQSRL LEDSFRQNHT LNPKQKEVLA KHLMLRPRQI EVWFQNRRAR SKLKQTEMEC
201: EYLKRWFGSL TEENHRLHRE VEELRAMKVG PTTVNSASSL TMCPRCERVT PAASPSRAVV PVPAKKTFPP QERDR
Arabidopsis Description
ATHB-17Homeobox-leucine zipper protein ATHB-17 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9N6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.