Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G70920.1 | CDX87097 | AT5G25160.1 | 21245844 |
AT1G70920.1 | CDX88160 | AT5G25160.1 | 21245844 |
AT1G70920.1 | CDY05377 | AT5G25160.1 | 21245844 |
AT1G70920.1 | CDY05474 | AT5G25160.1 | 21245844 |
AT1G70920.1 | CDY19813 | AT5G25160.1 | 21245844 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra007952.1-P | Field mustard | nucleus | 99.51 | 99.51 |
CDX96287 | Canola | nucleus | 72.68 | 82.32 |
CDX72758 | Canola | nucleus | 82.44 | 80.86 |
AT1G70920.1 | Thale cress | nucleus | 79.51 | 79.13 |
GSMUA_Achr4P06480_001 | Banana | nucleus | 44.88 | 55.42 |
CDX77824 | Canola | nucleus | 50.73 | 52.0 |
CDY40379 | Canola | nucleus | 49.27 | 51.53 |
CDY17676 | Canola | nucleus | 49.27 | 51.27 |
GSMUA_AchrUn_... | Banana | nucleus | 54.15 | 50.92 |
CDY63827 | Canola | nucleus | 48.29 | 50.51 |
TraesCS3A01G231600.1 | Wheat | nucleus | 52.2 | 48.2 |
GSMUA_Achr4P13440_001 | Banana | nucleus | 53.17 | 48.02 |
Zm00001d044081_P001 | Maize | nucleus | 52.68 | 48.0 |
TraesCS3D01G221800.1 | Wheat | nucleus | 51.71 | 47.75 |
TraesCS3B01G260800.1 | Wheat | nucleus | 51.71 | 47.75 |
Os01t0643600-00 | Rice | nucleus | 53.17 | 47.6 |
CDY41083 | Canola | nucleus | 29.76 | 47.29 |
EES03343 | Sorghum | nucleus | 51.22 | 45.65 |
CDY41046 | Canola | nucleus | 33.66 | 36.51 |
CDY25971 | Canola | nucleus | 39.51 | 32.4 |
CDY70444 | Canola | nucleus | 42.93 | 32.0 |
CDY67061 | Canola | nucleus | 42.93 | 32.0 |
CDY64679 | Canola | nucleus | 41.46 | 30.8 |
CDX77762 | Canola | nucleus | 40.98 | 30.66 |
CDY09626 | Canola | nucleus | 41.46 | 30.25 |
CDX71814 | Canola | nucleus | 41.95 | 30.18 |
CDX90473 | Canola | nucleus | 40.98 | 30.11 |
CDY64220 | Canola | nucleus | 35.12 | 29.88 |
CDX74693 | Canola | nucleus | 42.93 | 29.83 |
CDX81016 | Canola | nucleus | 37.56 | 29.62 |
CDY41168 | Canola | nucleus | 42.44 | 29.49 |
CDX69330 | Canola | nucleus | 39.51 | 28.72 |
CDY27404 | Canola | nucleus | 44.39 | 28.53 |
CDY60301 | Canola | nucleus | 37.56 | 28.52 |
CDY67919 | Canola | nucleus | 39.02 | 28.37 |
CDY37015 | Canola | nucleus | 43.9 | 28.04 |
CDX70076 | Canola | nucleus | 41.46 | 25.0 |
CDY55775 | Canola | nucleus | 39.02 | 24.84 |
CDX98948 | Canola | nucleus | 40.98 | 24.78 |
CDX78884 | Canola | nucleus | 21.95 | 17.86 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078EP22 | EnsemblPlants:CDY03710 | ProteinID:CDY03710 | ProteinID:CDY03710.1 |
ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00116514001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 |
PANTHER:PTHR24326:SF114 | SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EE6C5E | SEG:seg |
Description
BnaA02g15270D
Coordinates
chrLK031945:-:694338..696248
Molecular Weight (calculated)
23416.9 Da
IEP (calculated)
9.689
GRAVY (calculated)
-0.710
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSPNSSSL ELSISLPSFS QLSSHPSSGK HMVRDLDINQ TPKTEDREWI MIAAAPHANE EDSNSFGWRR KKLRLTKEQS HLLEESFIQN HTLTSKQKLE
101: LATFLKLSQR QVEVWFQNRR ARSKLKHTEM ECEYLKRCFG SLKEQNRLLQ KEVEELRALK AVPASILTMC PRCERATDAT DNAVKEGTAP RSQSRRTISS
201: SSSLC
101: LATFLKLSQR QVEVWFQNRR ARSKLKHTEM ECEYLKRCFG SLKEQNRLLQ KEVEELRALK AVPASILTMC PRCERATDAT DNAVKEGTAP RSQSRRTISS
201: SSSLC
001: MALSPNSSSL DLTISIPSFS PSPSLGDHHG MRDFDINQTP KTEEDREWMI GATPHVNEDD SNSGGRRRKK LRLTKEQSHL LEESFIQNHT LTPKQKKDLA
101: TFLKLSQRQV EVWFQNRRAR SKLKHTEMEC EYLKRWFGSL KEQNRRLQIE VEELRALKPS STSALTMCPR CERVTDAVDN DSNAVQEGAV LSSRSRMTIS
201: SSSSLC
101: TFLKLSQRQV EVWFQNRRAR SKLKHTEMEC EYLKRWFGSL KEQNRRLQIE VEELRALKPS STSALTMCPR CERVTDAVDN DSNAVQEGAV LSSRSRMTIS
201: SSSSLC
Arabidopsis Description
ATHB-XHomeobox-leucine zipper protein ATHB-X [Source:UniProtKB/Swiss-Prot;Acc:Q8GXM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.