Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004874.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| AT2G44910.1 | Thale cress | nucleus | 80.34 | 74.53 |
| CDY27404 | Canola | nucleus | 76.61 | 70.85 |
| CDY37015 | Canola | nucleus | 75.59 | 69.47 |
| CDX71814 | Canola | nucleus | 66.78 | 69.12 |
| CDY41168 | Canola | nucleus | 68.81 | 68.81 |
| KRH40151 | Soybean | nucleus | 44.75 | 57.64 |
| Solyc01g090460.2.1 | Tomato | nucleus | 52.54 | 54.2 |
| PGSC0003DMT400066838 | Potato | nucleus | 52.88 | 54.17 |
| CDY41046 | Canola | nucleus | 34.24 | 53.44 |
| KRH66562 | Soybean | nucleus | 55.93 | 53.23 |
| KRH01102 | Soybean | nucleus | 51.53 | 52.41 |
| CDY25971 | Canola | nucleus | 44.41 | 52.4 |
| KRH48783 | Soybean | nucleus | 55.93 | 52.05 |
| CDY70444 | Canola | nucleus | 47.8 | 51.27 |
| CDY67061 | Canola | nucleus | 47.8 | 51.27 |
| CDY09626 | Canola | nucleus | 48.14 | 50.53 |
| CDX77762 | Canola | nucleus | 46.78 | 50.37 |
| CDY64679 | Canola | nucleus | 47.12 | 50.36 |
| CDX90473 | Canola | nucleus | 45.76 | 48.39 |
| CDY40379 | Canola | nucleus | 31.19 | 46.94 |
| CDX81016 | Canola | nucleus | 40.68 | 46.15 |
| CDY63827 | Canola | nucleus | 30.51 | 45.92 |
| CDY17676 | Canola | nucleus | 30.17 | 45.18 |
| CDX77824 | Canola | nucleus | 30.51 | 45.0 |
| CDY03710 | Canola | nucleus | 29.83 | 42.93 |
| CDY64220 | Canola | nucleus | 34.24 | 41.91 |
| CDX98948 | Canola | nucleus | 46.78 | 40.71 |
| CDX70076 | Canola | nucleus | 46.78 | 40.59 |
| CDY41083 | Canola | nucleus | 17.63 | 40.31 |
| CDY55775 | Canola | nucleus | 43.73 | 40.06 |
| CDX72758 | Canola | nucleus | 28.14 | 39.71 |
| CDY60301 | Canola | nucleus | 35.59 | 38.89 |
| CDX96287 | Canola | nucleus | 23.73 | 38.67 |
| CDY67919 | Canola | nucleus | 36.95 | 38.65 |
| CDX69330 | Canola | nucleus | 36.61 | 38.3 |
| CDX78884 | Canola | nucleus | 28.47 | 33.33 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078CI38 | EnsemblPlants:CDX74693 | ProteinID:CDX74693 | ProteinID:CDX74693.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00116650001 |
| InterPro:HD-ZIP_N | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo |
| PFAM:PF00046 | PFAM:PF02183 | PFAM:PF04618 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF514 | SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002547E37 | SEG:seg |
Description
BnaA05g04390D
Coordinates
chrLK031802:-:206562..208360
Molecular Weight (calculated)
32327.0 Da
IEP (calculated)
9.129
GRAVY (calculated)
-0.796
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGERDDGLAL SLSLGFSQPK EPSLRLNLMP STTSSSFPRM QNHKNKHLPK KTHHSSWPHL FQPSGTTRIT AERNSNFGSF LRGFDVNRPP SVAVVVDLDE
101: ETAGMSSPNS NVSSVSGNKR DLAAAARGEG DETEGERASC SRGGGSCGSD DEDGGNGDGS RKKLRLSKEQ ALVLEETFKE HSTLNPKQKL ALAKQLNLRT
201: RQVEVWFQNR RARTKLKQTE VDCEYLKRCC DNLTEENRRL QKEVSGLRAL KLSPNLYMQM TPPTTLTMCP SCERVSASSS TVAAPPPPPS SSSAH
101: ETAGMSSPNS NVSSVSGNKR DLAAAARGEG DETEGERASC SRGGGSCGSD DEDGGNGDGS RKKLRLSKEQ ALVLEETFKE HSTLNPKQKL ALAKQLNLRT
201: RQVEVWFQNR RARTKLKQTE VDCEYLKRCC DNLTEENRRL QKEVSGLRAL KLSPNLYMQM TPPTTLTMCP SCERVSASSS TVAAPPPPPS SSSAH
001: MGERDDGLGL SLSLGNSQQK EPSLRLNLMP LTTSSSSSSF QHMHNQNNNS HPQKIHNISW THLFQSSGIK RTTAERNSDA GSFLRGFNVN RAQSSVAVVD
101: LEEEAAVVSS PNSAVSSLSG NKRDLAVARG GDENEAERAS CSRGGGSGGS DDEDGGNGDG SRKKLRLSKD QALVLEETFK EHSTLNPKQK LALAKQLNLR
201: ARQVEVWFQN RRARTKLKQT EVDCEYLKRC CDNLTEENRR LQKEVSELRA LKLSPHLYMH MTPPTTLTMC PSCERVSSSA ATVTAAPSTT TTPTVVGRPS
301: PQRLTPWTAI SLQQKSGR
101: LEEEAAVVSS PNSAVSSLSG NKRDLAVARG GDENEAERAS CSRGGGSGGS DDEDGGNGDG SRKKLRLSKD QALVLEETFK EHSTLNPKQK LALAKQLNLR
201: ARQVEVWFQN RRARTKLKQT EVDCEYLKRC CDNLTEENRR LQKEVSELRA LKLSPHLYMH MTPPTTLTMC PSCERVSSSA ATVTAAPSTT TTPTVVGRPS
301: PQRLTPWTAI SLQQKSGR
Arabidopsis Description
ATHB-4Uncharacterized protein At2g44910 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV86]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.