Factsheet for AT2G44910.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004874.1-P	Field mustard	nucleus	74.53	80.34
CDX74693	Canola	nucleus	74.53	80.34
CDY27404	Canola	nucleus	76.1	75.86
CDY37015	Canola	nucleus	75.16	74.45
Bra040335.1-P	Field mustard	nucleus	75.16	74.45
AT3G60390.1	Thale cress	nucleus	68.87	69.52
KRH40151	Soybean	nucleus	43.4	60.26
KRH01102	Soybean	nucleus	51.89	56.9
PGSC0003DMT400066838	Potato	nucleus	50.63	55.9
KRH66562	Soybean	nucleus	54.09	55.48
AT4G16780.1	Thale cress	nucleus	49.06	54.93
Solyc01g090460.2.1	Tomato	nucleus	49.37	54.9
KRH48783	Soybean	nucleus	54.72	54.89
AT5G47370.1	Thale cress	nucleus	45.28	50.88
AT4G17460.1	Thale cress	nucleus	44.65	50.35
AT5G06710.1	Thale cress	nucleus	43.08	40.77
AT4G37790.1	Thale cress	nucleus	35.53	40.65
AT1G70920.1	Thale cress	nucleus	25.79	39.81
AT2G22800.1	Thale cress	nucleus	33.96	39.42
AT2G01430.1	Thale cress	plasma membrane	28.3	32.73

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:819100	UniProt:A0A178VMQ6	ProteinID:AAC31833.1	EMBL:AB493589
ProteinID:AEC10483.1	EMBL:AJ441251	ArrayExpress:AT2G44910	EnsemblPlantsGene:AT2G44910	RefSeq:AT2G44910	TAIR:AT2G44910
RefSeq:AT2G44910-TAIR-G	EnsemblPlants:AT2G44910.1	TAIR:AT2G44910.1	Symbol:ATHB4	UniProt:C0SV86	ProteinID:CAA70771.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506
GO:GO:0009628	GO:GO:0009641	GO:GO:0009719	GO:GO:0009725	GO:GO:0009987	GO:GO:0010218
GO:GO:0043565	InterPro:HD-ZIP_N	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:Leu_zip_homeo	RefSeq:NP_182018.1	ProteinID:OAP07136.1	UniProt:P92953	PFAM:PF00046	PFAM:PF02183
PFAM:PF04618	PO:PO:0000037	PO:PO:0000191	PO:PO:0001078	PO:PO:0001081	PO:PO:0004507
PO:PO:0007611	PO:PO:0007616	PO:PO:0009009	PO:PO:0009010	PO:PO:0009031	PO:PO:0009046
PO:PO:0009052	PO:PO:0025022	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF514
SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0000001121	SEG:seg	:

Description

ATHB-4Uncharacterized protein At2g44910 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV86]

Coordinates

chr2:-:18517656..18519731

Molecular Weight (calculated)

34817.8 Da

IEP (calculated)

9.604

GRAVY (calculated)

-0.745

Length

318 amino acids

Sequence
(BLAST)

001: MGERDDGLGL SLSLGNSQQK EPSLRLNLMP LTTSSSSSSF QHMHNQNNNS HPQKIHNISW THLFQSSGIK RTTAERNSDA GSFLRGFNVN RAQSSVAVVD
101: LEEEAAVVSS PNSAVSSLSG NKRDLAVARG GDENEAERAS CSRGGGSGGS DDEDGGNGDG SRKKLRLSKD QALVLEETFK EHSTLNPKQK LALAKQLNLR
201: ARQVEVWFQN RRARTKLKQT EVDCEYLKRC CDNLTEENRR LQKEVSELRA LKLSPHLYMH MTPPTTLTMC PSCERVSSSA ATVTAAPSTT TTPTVVGRPS
301: PQRLTPWTAI SLQQKSGR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.