Factsheet for AT4G17460.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67061	Canola	nucleus	89.72	92.0
Bra026255.1-P	Field mustard	nucleus	89.36	91.97
CDX90473	Canola	nucleus	90.07	91.04
CDY70444	Canola	nucleus	88.3	90.55
CDY09626	Canola	nucleus	89.72	90.04
Bra012663.1-P	Field mustard	nucleus	90.07	89.12
AT5G47370.1	Thale cress	nucleus	78.01	77.74
AT4G16780.1	Thale cress	nucleus	53.9	53.52
VIT_15s0021g01880.t01	Wine grape	nucleus	53.9	53.33
AT3G60390.1	Thale cress	nucleus	54.61	48.89
AT2G44910.1	Thale cress	nucleus	50.35	44.65
AT1G70920.1	Thale cress	nucleus	29.79	40.78
AT4G37790.1	Thale cress	nucleus	39.01	39.57
AT5G06710.1	Thale cress	nucleus	46.45	38.99
AT2G22800.1	Thale cress	nucleus	36.88	37.96
AT2G01430.1	Thale cress	plasma membrane	32.98	33.82

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:827457	ProteinID:AAA56899.1	ProteinID:AEE83894.1	EMBL:AJ441252
EMBL:AK228587	ArrayExpress:AT4G17460	EnsemblPlantsGene:AT4G17460	RefSeq:AT4G17460	TAIR:AT4G17460	RefSeq:AT4G17460-TAIR-G
EnsemblPlants:AT4G17460.1	TAIR:AT4G17460.1	EMBL:AY087322	EMBL:BT005756	EMBL:BT006112	ProteinID:CAB10527.1
ProteinID:CAB78749.1	ncoils:Coil	GO:GO:0000003	GO:GO:0003006	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0010582	GO:GO:0043565	GO:GO:0043621	GO:GO:0048467	GO:GO:0080127	Symbol:HAT1
InterPro:HD-ZIP_N	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:Leu_zip_homeo	RefSeq:NP_193476.1	UniProt:P46600	PFAM:PF00046	PFAM:PF02183	PFAM:PF04618
PO:PO:0000013	PO:PO:0000037	PO:PO:0000056	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009049	PO:PO:0009052	PO:PO:0009062	PO:PO:0009074	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025034	PO:PO:0025281
PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF514	SMART:SM00340
SMART:SM00389	SUPFAM:SSF46689	EMBL:U09332	UniParc:UPI0000001122	SEG:seg	:

Description

HAT1Homeobox-leucine zipper protein HAT1 [Source:UniProtKB/Swiss-Prot;Acc:P46600]

Coordinates

chr4:+:9739518..9741234

Molecular Weight (calculated)

31556.4 Da

IEP (calculated)

8.594

GRAVY (calculated)

-0.770

Length

282 amino acids

Sequence
(BLAST)

001: MMMGKEDLGL SLSLGFAQNH PLQLNLKPTS SPMSNLQMFP WNQTLVSSSD QQKQQFLRKI DVNSLPTTVD LEEETGVSSP NSTISSTVSG KRRSTEREGT
101: SGGGCGDDLD ITLDRSSSRG TSDEEEDYGG ETCRKKLRLS KDQSAVLEDT FKEHNTLNPK QKLALAKKLG LTARQVEVWF QNRRARTKLK QTEVDCEYLK
201: RCVEKLTEEN RRLEKEAAEL RALKLSPRLY GQMSPPTTLL MCPSCERVAG PSSSNHNQRS VSLSPWLQMA HGSTFDVMRP RS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.