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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010612.1-P Field mustard nucleus 99.63 99.63
CDY64220 Canola nucleus 86.3 96.68
AT4G37790.1 Thale cress nucleus 84.81 82.37
CDX69330 Canola nucleus 84.81 81.21
CDY67919 Canola nucleus 84.81 81.21
PGSC0003DMT400055199 Potato nucleus 55.19 56.02
Solyc02g091930.2.1 Tomato nucleus 55.19 55.6
PGSC0003DMT400026968 Potato nucleus 49.63 52.76
KRH28314 Soybean nucleus 54.81 52.3
Solyc02g063520.2.1 Tomato nucleus 48.52 51.98
VIT_00s0732g00010.t01 Wine grape nucleus 52.96 50.53
KRH77172 Soybean nucleus 52.96 50.53
KRH04366 Soybean nucleus 53.7 46.47
CDY41046 Canola nucleus 32.22 46.03
KRH58171 Soybean extracellular, nucleus 51.48 45.57
CDY25971 Canola nucleus 38.15 41.2
CDY64679 Canola nucleus 41.11 40.22
CDX77762 Canola nucleus 40.74 40.15
CDX81016 Canola nucleus 37.78 39.23
CDX71814 Canola nucleus 40.37 38.25
CDY70444 Canola nucleus 38.52 37.82
CDY67061 Canola nucleus 38.52 37.82
CDY09626 Canola nucleus 39.26 37.72
CDX90473 Canola nucleus 38.89 37.63
CDY03710 Canola nucleus 28.52 37.56
CDY40379 Canola nucleus 27.04 37.24
CDY63827 Canola nucleus 27.04 37.24
CDX77824 Canola nucleus 27.41 37.0
CDY41168 Canola nucleus 40.37 36.95
CDX72758 Canola nucleus 28.52 36.84
CDY17676 Canola nucleus 26.67 36.55
CDY41083 Canola nucleus 17.41 36.43
CDX74693 Canola nucleus 38.89 35.59
CDY27404 Canola nucleus 41.11 34.8
CDY55775 Canola nucleus 41.11 34.47
CDY37015 Canola nucleus 40.74 34.27
CDX96287 Canola nucleus 22.59 33.7
CDX98948 Canola nucleus 40.74 32.45
CDX70076 Canola nucleus 40.37 32.06
CDX78884 Canola nucleus 25.19 26.98
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.1GO:A0A078J6J3UniProt:A0A078J6J3EnsemblPlants:CDY60301ProteinID:CDY60301
ProteinID:CDY60301.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0043565
EnsemblPlantsGene:GSBRNA2T00028477001InterPro:Homeobox-like_sfInterPro:Homeobox_CSInterPro:Homeobox_domInterPro:IPR001356InterPro:Leu_zip_homeo
InterPro:MIP_CSPFAM:PF00046PFAM:PF02183ScanProsite:PS00027ScanProsite:PS00221PFscan:PS50071
PANTHER:PTHR24326PANTHER:PTHR24326:SF327SMART:SM00340SMART:SM00389SUPFAM:SSF46689UniParc:UPI0000F35E7E
SEG:seg:::::
Description
BnaAnng16680DBnaAnng16680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6J3]
Coordinates
chrLK033866:+:19184..20483
Molecular Weight (calculated)
29762.3 Da
IEP (calculated)
8.325
GRAVY (calculated)
-0.610
Length
270 amino acids
Sequence
(BLAST)
001: MGLDDSCNTG LVLGLGLSPT HNSYNYAIKK SSATVDHHVN PSLTLSLSGE SYKVEKTVSG AGDQIYRQTS SHSGISSFSS GRIKREREVC GDGEEEAEET
101: EKRVVCSSVR DDHEDEEGFS ARKKLRLTKQ QSVLLEENFK MHSTLNPKQK QALARQLSLR PRQVEVWFQN RRARTKLKQT DVDCEFLKKC CETLTDENRR
201: LQKELQDLKA LKMSQPFYMH MPPATLMVCP SCERLGGGVA GGGRGSTVAV DGGTAKGAFS IPFINPSAAC
Best Arabidopsis Sequence Match ( AT4G37790.1 )
(BLAST)
001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
Arabidopsis Description
HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.