Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra010612.1-P | Field mustard | nucleus | 99.63 | 99.63 |
CDY64220 | Canola | nucleus | 86.3 | 96.68 |
AT4G37790.1 | Thale cress | nucleus | 84.81 | 82.37 |
CDX69330 | Canola | nucleus | 84.81 | 81.21 |
CDY67919 | Canola | nucleus | 84.81 | 81.21 |
PGSC0003DMT400055199 | Potato | nucleus | 55.19 | 56.02 |
Solyc02g091930.2.1 | Tomato | nucleus | 55.19 | 55.6 |
PGSC0003DMT400026968 | Potato | nucleus | 49.63 | 52.76 |
KRH28314 | Soybean | nucleus | 54.81 | 52.3 |
Solyc02g063520.2.1 | Tomato | nucleus | 48.52 | 51.98 |
VIT_00s0732g00010.t01 | Wine grape | nucleus | 52.96 | 50.53 |
KRH77172 | Soybean | nucleus | 52.96 | 50.53 |
KRH04366 | Soybean | nucleus | 53.7 | 46.47 |
CDY41046 | Canola | nucleus | 32.22 | 46.03 |
KRH58171 | Soybean | extracellular, nucleus | 51.48 | 45.57 |
CDY25971 | Canola | nucleus | 38.15 | 41.2 |
CDY64679 | Canola | nucleus | 41.11 | 40.22 |
CDX77762 | Canola | nucleus | 40.74 | 40.15 |
CDX81016 | Canola | nucleus | 37.78 | 39.23 |
CDX71814 | Canola | nucleus | 40.37 | 38.25 |
CDY70444 | Canola | nucleus | 38.52 | 37.82 |
CDY67061 | Canola | nucleus | 38.52 | 37.82 |
CDY09626 | Canola | nucleus | 39.26 | 37.72 |
CDX90473 | Canola | nucleus | 38.89 | 37.63 |
CDY03710 | Canola | nucleus | 28.52 | 37.56 |
CDY40379 | Canola | nucleus | 27.04 | 37.24 |
CDY63827 | Canola | nucleus | 27.04 | 37.24 |
CDX77824 | Canola | nucleus | 27.41 | 37.0 |
CDY41168 | Canola | nucleus | 40.37 | 36.95 |
CDX72758 | Canola | nucleus | 28.52 | 36.84 |
CDY17676 | Canola | nucleus | 26.67 | 36.55 |
CDY41083 | Canola | nucleus | 17.41 | 36.43 |
CDX74693 | Canola | nucleus | 38.89 | 35.59 |
CDY27404 | Canola | nucleus | 41.11 | 34.8 |
CDY55775 | Canola | nucleus | 41.11 | 34.47 |
CDY37015 | Canola | nucleus | 40.74 | 34.27 |
CDX96287 | Canola | nucleus | 22.59 | 33.7 |
CDX98948 | Canola | nucleus | 40.74 | 32.45 |
CDX70076 | Canola | nucleus | 40.37 | 32.06 |
CDX78884 | Canola | nucleus | 25.19 | 26.98 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078J6J3 | UniProt:A0A078J6J3 | EnsemblPlants:CDY60301 | ProteinID:CDY60301 |
ProteinID:CDY60301.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
EnsemblPlantsGene:GSBRNA2T00028477001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo |
InterPro:MIP_CS | PFAM:PF00046 | PFAM:PF02183 | ScanProsite:PS00027 | ScanProsite:PS00221 | PFscan:PS50071 |
PANTHER:PTHR24326 | PANTHER:PTHR24326:SF327 | SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0000F35E7E |
SEG:seg | : | : | : | : | : |
Description
BnaAnng16680DBnaAnng16680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6J3]
Coordinates
chrLK033866:+:19184..20483
Molecular Weight (calculated)
29762.3 Da
IEP (calculated)
8.325
GRAVY (calculated)
-0.610
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDDSCNTG LVLGLGLSPT HNSYNYAIKK SSATVDHHVN PSLTLSLSGE SYKVEKTVSG AGDQIYRQTS SHSGISSFSS GRIKREREVC GDGEEEAEET
101: EKRVVCSSVR DDHEDEEGFS ARKKLRLTKQ QSVLLEENFK MHSTLNPKQK QALARQLSLR PRQVEVWFQN RRARTKLKQT DVDCEFLKKC CETLTDENRR
201: LQKELQDLKA LKMSQPFYMH MPPATLMVCP SCERLGGGVA GGGRGSTVAV DGGTAKGAFS IPFINPSAAC
101: EKRVVCSSVR DDHEDEEGFS ARKKLRLTKQ QSVLLEENFK MHSTLNPKQK QALARQLSLR PRQVEVWFQN RRARTKLKQT DVDCEFLKKC CETLTDENRR
201: LQKELQDLKA LKMSQPFYMH MPPATLMVCP SCERLGGGVA GGGRGSTVAV DGGTAKGAFS IPFINPSAAC
001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
Arabidopsis Description
HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.