Factsheet for Bra026666.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017451.1-P	Field mustard	nucleus	85.9	83.75
CDY40379	Canola	nucleus	98.08	78.06
CDY63827	Canola	nucleus	96.79	77.04
Bra024888.1-P	Field mustard	nucleus	86.54	68.53
KRH50371	Soybean	nucleus	69.87	51.17
GSMUA_Achr4P06480_001	Banana	nucleus	53.85	50.6
KRG89300	Soybean	nucleus	70.51	50.23
AT2G01430.1	Thale cress	plasma membrane	87.18	49.45
VIT_01s0011g04870.t01	Wine grape	nucleus	71.15	49.33
Solyc05g008050.1.1	Tomato	nucleus	63.46	47.37
GSMUA_AchrUn_...	Banana	nucleus	65.38	46.79
TraesCS3A01G231600.1	Wheat	nucleus	64.74	45.5
TraesCS3B01G260800.1	Wheat	nucleus	64.74	45.5
TraesCS3D01G221800.1	Wheat	nucleus	64.74	45.5
Os01t0643600-00	Rice	nucleus	66.67	45.41
PGSC0003DMT400078329	Potato	nucleus	62.18	45.12
Zm00001d044081_P001	Maize	nucleus	64.74	44.89
EES03343	Sorghum	nucleus	64.74	43.91
GSMUA_Achr4P13440_001	Banana	nucleus	62.82	43.17
Bra007952.1-P	Field mustard	nucleus	54.49	41.46
Bra016174.1-P	Field mustard	nucleus	54.49	40.67
Bra026255.1-P	Field mustard	nucleus	50.64	28.83
Bra017489.1-P	Field mustard	nucleus	49.36	28.52
Bra024948.1-P	Field mustard	nucleus	49.36	27.9
Bra004874.1-P	Field mustard	nucleus	52.56	27.8
Bra040094.1-P	Field mustard	nucleus	50.64	27.72
Bra012663.1-P	Field mustard	nucleus	50.0	27.37
Bra007530.1-P	Field mustard	nucleus	53.21	26.69
Bra017853.1-P	Field mustard	nucleus	47.44	26.33
Bra011786.1-P	Field mustard	nucleus	47.44	26.24
Bra030200.1-P	Field mustard	nucleus	46.79	25.98
Bra040335.1-P	Field mustard	nucleus	53.21	25.86
Bra005907.1-P	Field mustard	nucleus	53.21	25.78
Bra010612.1-P	Field mustard	nucleus	44.23	25.56
Bra009219.1-P	Field mustard	nucleus	53.85	24.71

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EnsemblPlantsGene:Bra026666	EnsemblPlants:Bra026666.1	EnsemblPlants:Bra026666.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0043565
InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	UniProt:M4ED06
PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF114
SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002546C71	SEG:seg	:

Description

AT2G01430 (E=4e-064) ATHB17, ATHB-17 | ATHB17 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17); transcription factor

Coordinates

chrA02:+:21263387..21267955

Molecular Weight (calculated)

18249.0 Da

IEP (calculated)

10.521

GRAVY (calculated)

-0.966

Length

156 amino acids

Sequence
(BLAST)

001: MNRLPWSEDD EELCHGGSAP PRKKLRLTRE QSRLLEDSFR QNHTLNPKQK EALAKHLMLR PRQIEVWFQN RRARSKLKQT EMECEYLKRW FGSLTEQNHR
101: LHREVEELRA MKVAPSTVTS TSSLTMCPRC ERVTTAASPS MAASAKKALP LKEREH

Best Arabidopsis Sequence Match ( AT2G01430.1 )
(BLAST)

001: MIKLLFTYIC TYTYKLYALY HMDYACVCMY KYKGIVTLQV CLFYIKLRVF LSNFTFSSSI LALKNPNNSL IKIMAILPEN SSNLDLTISV PGFSSSPLSD
101: EGSGGGRDQL RLDMNRLPSS EDGDDEEFSH DDGSAPPRKK LRLTREQSRL LEDSFRQNHT LNPKQKEVLA KHLMLRPRQI EVWFQNRRAR SKLKQTEMEC
201: EYLKRWFGSL TEENHRLHRE VEELRAMKVG PTTVNSASSL TMCPRCERVT PAASPSRAVV PVPAKKTFPP QERDR

Arabidopsis Description

ATHB-17Homeobox-leucine zipper protein ATHB-17 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9N6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.