Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032546 | Potato | nucleus | 95.27 | 93.57 |
| Solyc08g078300.2.1 | Tomato | nucleus | 71.64 | 70.36 |
| Solyc06g060830.2.1 | Tomato | nucleus | 64.73 | 59.73 |
| GSMUA_Achr11P... | Banana | nucleus | 52.73 | 58.7 |
| GSMUA_Achr5P13530_001 | Banana | nucleus | 56.73 | 55.91 |
| Zm00001d002754_P001 | Maize | nucleus | 44.36 | 53.74 |
| GSMUA_Achr2P10040_001 | Banana | nucleus | 56.73 | 53.42 |
| GSMUA_Achr7P06950_001 | Banana | nucleus | 34.91 | 53.04 |
| GSMUA_Achr4P21600_001 | Banana | nucleus | 53.09 | 52.71 |
| Solyc01g090460.2.1 | Tomato | nucleus | 54.55 | 52.45 |
| HORVU2Hr1G097940.2 | Barley | nucleus | 42.91 | 52.44 |
| GSMUA_Achr1P01670_001 | Banana | nucleus | 56.36 | 52.19 |
| TraesCS2A01G415900.1 | Wheat | nucleus | 42.91 | 51.98 |
| EES12613 | Sorghum | nucleus | 44.0 | 51.93 |
| TraesCS2B01G434900.1 | Wheat | nucleus | 42.91 | 51.3 |
| TraesCS2D01G412900.1 | Wheat | nucleus | 42.55 | 50.87 |
| Os04t0548700-01 | Rice | nucleus | 44.73 | 49.8 |
| GSMUA_Achr1P04360_001 | Banana | nucleus | 53.45 | 48.68 |
| Solyc05g008050.1.1 | Tomato | nucleus | 33.82 | 44.5 |
| Solyc02g091930.2.1 | Tomato | nucleus | 42.55 | 43.66 |
| Solyc02g063520.2.1 | Tomato | nucleus | 39.27 | 42.86 |
| GSMUA_AchrUn_... | Banana | plastid | 46.91 | 41.35 |
| TraesCS1B01G232700.2 | Wheat | nucleus | 48.36 | 40.67 |
| Os10t0561800-01 | Rice | nucleus | 45.82 | 40.51 |
| TraesCS1D01G220900.1 | Wheat | nucleus | 48.0 | 40.49 |
| Zm00001d029934_P001 | Maize | nucleus | 46.55 | 39.88 |
| TraesCS1A01G219200.1 | Wheat | nucleus | 47.64 | 39.82 |
| EER94486 | Sorghum | nucleus | 48.36 | 38.44 |
| Solyc04g077220.2.1 | Tomato | nucleus | 36.73 | 38.26 |
| HORVU1Hr1G055930.1 | Barley | nucleus | 47.64 | 36.29 |
| Solyc07g054380.1.1 | Tomato | nucleus | 27.27 | 36.23 |
| Solyc10g080540.1.1 | Tomato | nucleus | 45.09 | 35.03 |
| Solyc01g073910.2.1 | Tomato | nucleus | 45.82 | 34.52 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HD-ZIP_N | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | UniProt:K4CIL4 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PFAM:PF04618 |
| PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF486 | SMART:SM00340 |
| SMART:SM00389 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc08g007270.2 | EnsemblPlants:Solyc08g007270.2.1 | UniParc:UPI000276C44A | SEG:seg |
Description
No Description!
Coordinates
chr8:-:1840156..1842425
Molecular Weight (calculated)
31461.6 Da
IEP (calculated)
8.497
GRAVY (calculated)
-0.740
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MLENQDLRLS LSLSFSENKT TNPLQLNSWI GSFPSSDRNL EKCRTFLKGI DVNIIPTNTE EEVGVSSPNS SISSLSGNKR NEREIINCCD ELEIERECSR
101: SISDEEDGET SRKKLRLTKD QSIVLEESFK EHNTLNPKQK QALAKRLGLR PRQVEVWFQN RRARTKLKQT EVDCELLKRC CENLTEENRR LQKEVQELRA
201: LKLSPQLYMQ MTPPTTLTMC PSCERVAGPS AMSGPASIDI RTNQMVLARQ RPVPFNLWTA SPVPHRPINT LHPRS
101: SISDEEDGET SRKKLRLTKD QSIVLEESFK EHNTLNPKQK QALAKRLGLR PRQVEVWFQN RRARTKLKQT EVDCELLKRC CENLTEENRR LQKEVQELRA
201: LKLSPQLYMQ MTPPTTLTMC PSCERVAGPS AMSGPASIDI RTNQMVLARQ RPVPFNLWTA SPVPHRPINT LHPRS
001: MMFEKDDLGL SLGLNFPKKQ INLKSNPSVS VTPSSSSFGL FRRSSWNESF TSSVPNSDSS QKETRTFIRG IDVNRPPSTA EYGDEDAGVS SPNSTVSSST
101: GKRSEREEDT DPQGSRGISD DEDGDNSRKK LRLSKDQSAI LEETFKDHST LNPKQKQALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC EFLRRCCENL
201: TEENRRLQKE VTELRALKLS PQFYMHMSPP TTLTMCPSCE HVSVPPPQPQ AATSAHHRSL PVNAWAPATR ISHGLTFDAL RPRS
101: GKRSEREEDT DPQGSRGISD DEDGDNSRKK LRLSKDQSAI LEETFKDHST LNPKQKQALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC EFLRRCCENL
201: TEENRRLQKE VTELRALKLS PQFYMHMSPP TTLTMCPSCE HVSVPPPQPQ AATSAHHRSL PVNAWAPATR ISHGLTFDAL RPRS
Arabidopsis Description
HAT4Homeobox-leucine zipper protein HAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q05466]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.