CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER93250
KXG22966
KXG26216
OQU82880
OQU90135

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72710.1	KXG22966	AT2G27770.1	21798944
AT1G72710.1	KXG26216	AT2G27770.1	21798944
AT1G72710.1	OQU82880	AT2G27770.1	21798944
AT4G26100.1	EER93250	AT5G28150.1	21798944
AT4G26100.1	OQU90135	AT5G28150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G066800.6	Barley	cytosol	91.7	90.93
TraesCS3D01G252000.2	Wheat	cytosol	89.15	88.58
TraesCS3B01G281100.2	Wheat	cytosol	89.15	88.58
TraesCS3A01G251600.2	Wheat	cytosol	89.15	88.58
Zm00001d011696_P002	Maize	cytosol	82.13	87.13
KRH12426	Soybean	cytosol	43.62	85.42
GSMUA_Achr4P09160_001	Banana	cytosol	82.34	82.34
VIT_09s0002g01740.t01	Wine grape	cytosol	82.34	82.17
VIT_11s0016g01950.t01	Wine grape	cytosol	82.77	82.07
Zm00001d043693_P002	Maize	cytosol	80.64	81.68
GSMUA_Achr4P08690_001	Banana	cytosol	81.28	80.76
GSMUA_Achr7P24210_001	Banana	cytosol	80.85	79.17
Bra035646.1-P	Field mustard	cytosol	60.43	78.89
EES20064	Sorghum	cytosol	78.94	78.27
PGSC0003DMT400082747	Potato	cytosol	78.3	77.97
Solyc07g040720.2.1	Tomato	nucleus	77.66	77.33
Solyc03g121820.2.1	Tomato	cytosol, nucleus	77.23	77.23
PGSC0003DMT400006625	Potato	cytosol	77.23	77.07
GSMUA_Achr5P09640_001	Banana	cytosol	77.02	76.86
Solyc05g016410.2.1	Tomato	cytosol, nucleus	76.6	76.76
GSMUA_AchrUn_...	Banana	cytosol	77.23	76.74
AT1G72710.1	Thale cress	cytosol	75.53	76.34
CDY49859	Canola	cytosol	75.11	75.91
GSMUA_Achr6P35790_001	Banana	cytosol	76.38	75.74
Solyc06g062790.2.1	Tomato	cytosol, nucleus	75.11	75.59
CDX96430	Canola	cytosol	74.68	75.48
Bra008043.1-P	Field mustard	cytosol	74.68	75.48
Bra016039.1-P	Field mustard	cytosol	74.68	75.48
AT5G57015.1	Thale cress	cytosol	69.57	75.17
CDY20695	Canola	cytosol	66.81	75.12
PGSC0003DMT400012385	Potato	cytosol	74.47	74.95
GSMUA_Achr8P24940_001	Banana	cytosol	78.51	74.85
CDY53866	Canola	cytosol	70.85	74.66
CDY11892	Canola	cytosol	68.3	74.65
CDY32908	Canola	cytosol	66.38	74.46
CDX88601	Canola	cytosol	68.09	74.42
Bra006839.1-P	Field mustard	cytosol	68.09	74.42
CDY38255	Canola	cytosol	67.87	74.19
CDY54387	Canola	cytosol	68.3	74.13
Bra002771.1-P	Field mustard	cytosol	68.09	73.9
CDX72938	Canola	cytosol	74.26	73.78
AT4G26100.1	Thale cress	cytosol	69.79	72.89
Bra013949.1-P	Field mustard	cytosol	70.85	72.39
CDX94377	Canola	cytosol	70.64	72.17
EES00938	Sorghum	cytosol	70.0	70.0
CDY69293	Canola	cytosol	48.94	66.09
KXG26713	Sorghum	cytosol	58.94	60.88
KXG31326	Sorghum	cytosol	60.0	60.52
EES05449	Sorghum	cytosol	58.3	58.92
KXG30048	Sorghum	cytosol	51.49	57.76
KXG38336	Sorghum	cytosol	58.51	57.41
GSMUA_Achr3P32300_001	Banana	endoplasmic reticulum, plasma membrane	47.02	57.11
KXG31490	Sorghum	cytosol	50.43	54.99
CDX82685	Canola	cytosol, nucleus, vacuole	23.19	35.05
EES00121	Sorghum	cytosol	32.34	24.96
EES19200	Sorghum	cytosol	32.13	24.88
OQU79738	Sorghum	nucleus	32.34	24.64
OQU79450	Sorghum	nucleus	31.28	24.58
KXG34480	Sorghum	cytosol	32.77	21.63
EER93310	Sorghum	mitochondrion, plastid	30.85	20.51
OQU87630	Sorghum	plastid	32.34	19.95

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EntrezGene:8059167	UniProt:C5XHN8	EnsemblPlants:EES01354	ProteinID:EES01354
ProteinID:EES01354.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150
GO:GO:0008152	GO:GO:0008360	GO:GO:0009653	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF162	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3003G273600	SUPFAM:SSF56112	unigene:Sbi.8465	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001A847C5	RefSeq:XP_002456234.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:60988316..60993620

Molecular Weight (calculated)

52805.6 Da

IEP (calculated)

10.160

GRAVY (calculated)

-0.595

Length

470 amino acids

Sequence
(BLAST)

001: MEPRVGNKFR LGRKIGSGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKIYRILQ GGTGIPNVRW FGVEGDYNVL VMDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRVEFVH SKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDTS THQHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYEKISE KKVATSIEAL CRGYPTEFAS YFHYCRSLRF DDKPDYSYLK RLFRDLFIRE GFQFDYVFDW TILKYQQSQI
301: ATAPPRVGHG AGPSGLAPAL QNDRQSGPEE ARTSGWSSMD RRRAPLPITS VGTLSKQKAP VGNDATVSRD AVISGPNFLG RSSGSSRRPV ISTSRDVVAT
401: DSSEPSRART TDASPGAFRR ASGPQRSSPV HSAEQKRSSS GRHPSNVKNY DSALKGIEGL NFDGDERVQY

Best Arabidopsis Sequence Match ( AT1G72710.1 )
(BLAST)

001: MEPRVGNKFR LGRKIGGGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKLYKVLQ GGTGVPNVKW YGVEGDYNVL VIDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRIEFVH QKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDSN HQHIPYRENK NLTGTARYAS MNTHLGIEQS RRDDLESLGF
201: VLMYFLKGSL PWQGLKAGNK KQKYEKISEK KVSTSIEALC RGYPSEFASY FHYCRSLRFD DKPDYAYLKR LFRDLFIREG FQFDYVFDWT ILKYQQSQIS
301: TPPPRHHGPV VGPSSALPPA ITSAERPSGG DEARPSGWSS GIPRRNSGQI FNSGSLAKQK APVSSDPAIS KDVVLSSSSF LRATGSSRRA AVSSSREAAV
401: LGTDSEPSNP QIVEAGSGSN SKIPVSRNSP IVSSEINKLS SPSRATTSVM KNYEANLKGI ESLHF

Arabidopsis Description

CKL2Casein kinase 1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.