Factsheet for Bra013949.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009991.1-P
Bra036119.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26100.1	Bra009991.1-P	AT5G28150.1	21798944
AT4G26100.1	Bra036119.1-P	AT5G28150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94377	Canola	cytosol	99.78	99.78
AT4G26100.1	Thale cress	cytosol	89.35	91.33
Bra035646.1-P	Field mustard	cytosol	68.04	86.94
Bra002771.1-P	Field mustard	cytosol	81.09	86.14
Bra006839.1-P	Field mustard	cytosol	78.91	84.42
KRH12426	Soybean	cytosol	42.83	82.08
VIT_11s0016g01950.t01	Wine grape	cytosol	77.83	75.53
VIT_09s0002g01740.t01	Wine grape	cytosol	75.43	73.67
Solyc03g121820.2.1	Tomato	cytosol, nucleus	75.0	73.4
PGSC0003DMT400006625	Potato	cytosol	75.0	73.25
PGSC0003DMT400012385	Potato	cytosol	73.91	72.81
Solyc06g062790.2.1	Tomato	cytosol, nucleus	73.48	72.38
Bra008043.1-P	Field mustard	cytosol	73.04	72.26
GSMUA_Achr4P08690_001	Banana	cytosol	73.91	71.88
Solyc05g016410.2.1	Tomato	cytosol, nucleus	73.26	71.86
Bra016039.1-P	Field mustard	cytosol	72.61	71.83
GSMUA_Achr4P09160_001	Banana	cytosol	73.26	71.7
PGSC0003DMT400082747	Potato	cytosol	72.83	70.97
EES01354	Sorghum	cytosol	72.39	70.85
Solyc07g040720.2.1	Tomato	nucleus	72.61	70.76
GSMUA_AchrUn_...	Banana	cytosol	72.17	70.19
HORVU3Hr1G066800.6	Barley	cytosol	72.17	70.04
TraesCS3B01G281100.2	Wheat	cytosol	71.52	69.56
TraesCS3D01G252000.2	Wheat	cytosol	71.52	69.56
TraesCS3A01G251600.2	Wheat	cytosol	71.3	69.34
GSMUA_Achr7P24210_001	Banana	cytosol	72.17	69.17
GSMUA_Achr6P35790_001	Banana	cytosol	70.22	68.14
GSMUA_Achr5P09640_001	Banana	cytosol	69.13	67.52
Bra036721.1-P	Field mustard	cytosol	63.26	66.59
GSMUA_Achr8P24940_001	Banana	cytosol	69.13	64.5
Zm00001d011696_P002	Maize	cytosol	61.09	63.43
Zm00001d043693_P002	Maize	cytosol	61.09	60.56
Bra032536.1-P	Field mustard	cytosol	59.57	60.22
Bra023732.1-P	Field mustard	cytosol	56.09	59.58
Bra027528.1-P	Field mustard	cytosol	59.78	57.53
Bra010762.1-P	Field mustard	cytosol	56.52	57.52
Bra010361.1-P	Field mustard	cytosol	59.35	57.11
Bra011038.1-P	Field mustard	cytosol	59.13	56.55
Bra011067.1-P	Field mustard	cytosol	50.65	55.88
Bra035974.1-P	Field mustard	cytosol	57.17	55.37
Bra027483.1-P	Field mustard	cytosol	57.61	54.98
Bra015317.1-P	Field mustard	cytosol	54.57	54.8
Bra032511.1-P	Field mustard	cytosol	55.22	54.39
Bra024179.1-P	Field mustard	cytosol, plastid	48.04	51.64
GSMUA_Achr3P32300_001	Banana	endoplasmic reticulum, plasma membrane	40.65	48.32
Bra024191.1-P	Field mustard	cytosol	26.96	40.92
Bra007778.1-P	Field mustard	cytosol	30.65	23.5
Bra023667.1-P	Field mustard	cytosol	31.74	21.34
Bra006445.1-P	Field mustard	cytosol	31.09	21.06
Bra002140.1-P	Field mustard	cytosol	30.87	20.55
Bra021498.1-P	Field mustard	cytosol	29.57	19.91
Bra036426.1-P	Field mustard	cytosol	30.43	19.89
Bra001518.1-P	Field mustard	cytosol	29.35	19.77
Bra027409.1-P	Field mustard	cytosol, plastid	29.57	19.74
Bra031961.1-P	Field mustard	cytosol	30.22	17.33
Bra013948.1-P	Field mustard	cytosol	8.26	8.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EnsemblPlantsGene:Bra013949	EnsemblPlants:Bra013949.1	EnsemblPlants:Bra013949.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4DBT9	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909
PANTHER:PTHR11909:SF298	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002546BEE	SEG:seg	:	:	:	:

Description

AT4G26100 (E=1e-222) CK1, CKL1 | CK1 (CASEIN KINASE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA01:-:8648740..8651335

Molecular Weight (calculated)

52263.8 Da

IEP (calculated)

9.923

GRAVY (calculated)

-0.626

Length

460 amino acids

Sequence
(BLAST)

001: MESRVGNKFR LGRKIGSGSF GEIYLGTNIQ TNEEVAIKLE SVKTKHPQLL YESKLYKILQ GGTGVPNVKW YGVEGDYNVL VIDLLGPSLE DLFNFCSRKL
101: SLKSVLMLAD QMINRVEFFH SKSFLHRDLK PDNFLMGLGR RANQVYIIDF GLAKKYRDST THQHIPYREN KNLTGTARYA SMNTHLGIEQ SRRDDLESLG
201: YILMYFLKGS LPWQGLKAGN KKQKYERISE KKVSTSIEVL CRGYPSEFAS YFHYCRSLRF DDKPDYAYLK RIFRDLFIRE GFQFDYVFDW TILKYQQSQL
301: TAPPSRNLNP AVGTSAALPP GVSNIDRYTG EEEGRPVGYS HMESSRRRAS GTLDHSGNLS NQQTSSFNRD SMMPSSSMFA QSAGSSRRVA AVSSRDNLLS
401: GEEFQRSHRT GDVSRGGVIS RNSPVEAGKR SSSSRRHYES AIKGIDNLQV SSDDKFHHHH

Best Arabidopsis Sequence Match ( AT4G26100.1 )
(BLAST)

001: MEPRVGNKFR LGRKIGSGSF GEIYLGTNIH TNEELAIKLE NVKTKHPQLL YESKLYRILQ GGTGVPNVKW FGVEGDYNVL VMDLLGPSLE DLFNFCSRKL
101: SLKSVLMLAD QMINRVEFFH SKSFLHRDLK PDNFLMGLGR RANQVYIIDF GLAKKYRDST THQHIPYREN KNLTGTARYA SMNTHLGIEQ SRRDDLESLG
201: YILMYFLKGS LPWQGLKAGT KKQKYERISE KKVSTSIEAL CRGYPSEFAS YFHYCRSLRF DDKPDYAYLK RIFRDLFIRE GFQFDYVFDW TILKYQQSQL
301: TAPPSRALNP AVGTSAALPP GISNIDRYTG EEEGRPHMES SRRRVSGALD NSGNISNQPT SSSARDSMIP SSSLFAQSAG SSRRVTAVSG SRDNFPGSEE
401: LLQRSRTGDV SRGVIPRNSP GEAGKSTRRH YESVVKGIDN LQVSDEHHPH

Arabidopsis Description

CKL1CKL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UYM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.