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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G196200.1
TraesCS2A01G292300.1
TraesCS2B01G223900.1
TraesCS2B01G308700.1
TraesCS2D01G204300.1
TraesCS2D01G290200.1
TraesCS4A01G183900.1
TraesCS4A01G302100.1
TraesCS4B01G012200.1
TraesCS4B01G134800.1
TraesCS4D01G010300.1
TraesCS4D01G129600.1
TraesCS5A01G130200.1
TraesCS5A01G456500.1
TraesCS5B01G130100.1
TraesCS5B01G465500.1
TraesCS5D01G137700.1
TraesCS5D01G467300.1
TraesCS7A01G277900.1
TraesCS7B01G175700.1
TraesCS7D01G277700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G72710.1 TraesCS2A01G292300.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS2B01G308700.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS2D01G290200.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS4A01G183900.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS4A01G302100.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS4B01G012200.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS4B01G134800.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS4D01G010300.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS4D01G129600.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS5A01G130200.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS5B01G130100.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS5D01G137700.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS7A01G277900.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS7B01G175700.1 AT2G27770.1 21798944
AT1G72710.1 TraesCS7D01G277700.1 AT2G27770.1 21798944
AT4G26100.1 TraesCS2A01G196200.1 AT5G28150.1 21798944
AT4G26100.1 TraesCS2B01G223900.1 AT5G28150.1 21798944
AT4G26100.1 TraesCS2D01G204300.1 AT5G28150.1 21798944
AT4G26100.1 TraesCS5A01G456500.1 AT5G28150.1 21798944
AT4G26100.1 TraesCS5B01G465500.1 AT5G28150.1 21798944
AT4G26100.1 TraesCS5D01G467300.1 AT5G28150.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G252000.2 Wheat cytosol 99.58 99.58
TraesCS3B01G281100.2 Wheat cytosol 99.58 99.58
HORVU3Hr1G066800.6 Barley cytosol 95.98 95.78
EES01354 Sorghum cytosol 88.58 89.15
KRH12426 Soybean cytosol 43.13 85.0
GSMUA_Achr4P09160_001 Banana cytosol 80.55 81.06
VIT_09s0002g01740.t01 Wine grape cytosol 79.49 79.83
VIT_11s0016g01950.t01 Wine grape cytosol 79.49 79.32
Zm00001d011696_P002 Maize cytosol 74.21 79.23
GSMUA_Achr4P08690_001 Banana cytosol 79.07 79.07
Bra035646.1-P Field mustard cytosol 59.41 78.06
GSMUA_Achr7P24210_001 Banana cytosol 78.65 77.5
TraesCS1A01G442600.1 Wheat cytosol 77.59 77.43
PGSC0003DMT400082747 Potato cytosol 76.53 76.69
GSMUA_AchrUn_... Banana cytosol 76.32 76.32
Solyc07g040720.2.1 Tomato nucleus 76.11 76.27
Solyc03g121820.2.1 Tomato cytosol, nucleus 75.26 75.74
PGSC0003DMT400006625 Potato cytosol 75.26 75.58
Solyc05g016410.2.1 Tomato cytosol, nucleus 74.84 75.48
GSMUA_Achr5P09640_001 Banana cytosol 75.05 75.37
GSMUA_Achr6P35790_001 Banana cytosol 75.48 75.32
AT1G72710.1 Thale cress cytosol 74.0 75.27
Zm00001d043693_P002 Maize cytosol 73.36 74.78
Bra016039.1-P Field mustard cytosol 73.36 74.62
CDX96430 Canola cytosol 73.36 74.62
TraesCS3A01G207000.2 Wheat cytosol 73.57 74.52
Solyc06g062790.2.1 Tomato cytosol, nucleus 73.57 74.52
PGSC0003DMT400012385 Potato cytosol 73.36 74.3
CDY49859 Canola cytosol 72.94 74.19
GSMUA_Achr8P24940_001 Banana cytosol 76.96 73.83
Bra008043.1-P Field mustard cytosol 72.52 73.76
CDY11892 Canola cytosol 66.81 73.49
AT5G57015.1 Thale cress cytosol 67.44 73.33
CDX88601 Canola cytosol 66.6 73.26
CDY38255 Canola cytosol 66.6 73.26
Bra006839.1-P Field mustard cytosol 66.6 73.26
CDX72938 Canola cytosol 73.15 73.15
Bra002771.1-P Field mustard cytosol 66.81 72.98
CDY54387 Canola cytosol 66.81 72.98
CDY20695 Canola cytosol 64.48 72.97
CDY53866 Canola cytosol 68.71 72.87
CDY32908 Canola cytosol 64.06 72.31
AT4G26100.1 Thale cress cytosol 68.71 72.22
Bra013949.1-P Field mustard cytosol 69.34 71.3
CDX94377 Canola cytosol 69.13 71.09
CDY69293 Canola cytosol 47.57 64.66
TraesCS6A01G378000.1 Wheat cytosol 59.41 59.41
TraesCS6A01G196400.2 Wheat cytosol 50.74 58.54
TraesCS6A01G225600.1 Wheat cytosol 57.08 57.94
TraesCS3A01G155400.4 Wheat cytosol 49.47 57.92
GSMUA_Achr3P32300_001 Banana endoplasmic reticulum, plasma membrane 46.3 56.59
TraesCS5A01G426700.2 Wheat cytosol 56.87 56.16
TraesCS4A01G458900.1 Wheat cytosol 40.38 55.52
TraesCS1A01G442800.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 34.04 45.35
CDX82685 Canola cytosol, nucleus, vacuole 23.04 35.05
TraesCS1A01G123900.2 Wheat cytosol 32.14 24.92
TraesCS5A01G000600.2 Wheat cytosol 31.29 24.79
TraesCS3A01G311600.3 Wheat cytosol 31.08 24.22
TraesCS3A01G275100.1 Wheat cytosol 31.71 22.46
TraesCS5A01G431600.1 Wheat mitochondrion 32.14 21.47
TraesCS2A01G238600.1 Wheat cytosol 31.29 20.99
TraesCS3A01G323100.2 Wheat nucleus 30.44 20.75
TraesCS1A01G442500.1 Wheat plastid 19.03 12.75
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.4.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR11909PANTHER:PTHR11909:SF162
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:TraesCS3A01G251600
EnsemblPlants:TraesCS3A01G251600.2TIGR:cd14125SEG:seg:::
Description
No Description!
Coordinates
chr3A:-:471358674..471362996
Molecular Weight (calculated)
52983.8 Da
IEP (calculated)
10.231
GRAVY (calculated)
-0.553
Length
473 amino acids
Sequence
(BLAST)
001: MEPRVGNKFR LGRKIGSGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKIYRILQ GGTGIPNVRW FGVEGDYNVL VMDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRVEFVH SKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDTS THQHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYEKISE KKVATSIEAL CRGYPTEFTS YFHYCRSLRF DDKPDYSYLK RLFRDLFIRE GFQFDYVFDW TILKYQQSQI
301: ASAPPRVAGH GAGPSGLTPP VLQNDSQSGA VEGRISGWSA MDRRRAPPPI ASVGTSNKQK APVGNDAPIS KDPAISGLNF LGRSSGSSRR AAVSSSRDAV
401: ASDTFEPSRS RTTDASPGAF RRTSGAQRSP PVDSAEPQRS SSARHSSNPK NYESALKAFP VEFWITGDAT RRM
Best Arabidopsis Sequence Match ( AT1G03930.1 )
(BLAST)
001: MDLVIGGKFK LGRKIGSGSF GELYLGINVQ TGEEVAVKLE SVKTKHPQLH YESKLYMLLQ GGTGVPNLKW YGVEGDYNVM VIDLLGPSLE DLFNYCNRKL
101: SLKTVLMLAD QLINRVEFMH TRGFLHRDIK PDNFLMGLGR KANQVYIIDF GLGKKYRDLQ THRHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLEALG
201: YVLMYFLKGS LPWQGLKAGT KKQKYDRISE KKVATPIEVL CKNQPSEFVS YFRYCRSLRF DDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TVLKYPQIGS
301: SSGSSSRTRN HTTANPGLTA GASLEKQERI AGKETRENRF SGAVEAFSRR HPATSTTRDR SASRNSVDGP LSKHPPGDSE RPRSSSRYGS SSRRAIPSSS
401: RPSSAGGPSD SRSSSRLVTS TGGVGTVSNR ASTSQRIQAG NESRTSSFSR AARNTREDPL RRSLELLTLR K
Arabidopsis Description
CKL9Casein kinase 1-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWB3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.