CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX77134
CDY30531

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72710.1	CDX77134	AT2G27770.1	21798944
AT1G72710.1	CDY30531	AT2G27770.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016039.1-P	Field mustard	cytosol	100.0	100.0
CDX72938	Canola	cytosol	99.57	97.89
CDY53866	Canola	cytosol	89.03	92.83
CDY49859	Canola	cytosol	92.47	92.47
AT1G72710.1	Thale cress	cytosol	92.47	92.47
KRH12426	Soybean	cytosol	42.15	81.67
VIT_09s0002g01740.t01	Wine grape	cytosol	78.92	77.92
VIT_11s0016g01950.t01	Wine grape	cytosol	78.49	77.0
Solyc05g016410.2.1	Tomato	cytosol, nucleus	77.63	76.97
PGSC0003DMT400082747	Potato	cytosol	78.06	76.91
Solyc03g121820.2.1	Tomato	cytosol, nucleus	77.63	76.81
Solyc07g040720.2.1	Tomato	nucleus	77.85	76.69
Solyc06g062790.2.1	Tomato	cytosol, nucleus	76.56	76.23
PGSC0003DMT400012385	Potato	cytosol	76.34	76.02
PGSC0003DMT400006625	Potato	cytosol	76.99	76.01
GSMUA_Achr4P09160_001	Banana	cytosol	76.77	75.96
GSMUA_Achr4P08690_001	Banana	cytosol	76.99	75.69
EES01354	Sorghum	cytosol	75.48	74.68
CDY11892	Canola	cytosol	68.6	74.19
HORVU3Hr1G066800.6	Barley	cytosol	75.48	74.05
CDX88601	Canola	cytosol	68.39	73.95
GSMUA_AchrUn_...	Banana	cytosol	75.05	73.78
TraesCS3B01G281100.2	Wheat	cytosol	74.84	73.57
TraesCS3D01G252000.2	Wheat	cytosol	74.84	73.57
CDY20695	Canola	cytosol	66.02	73.44
TraesCS3A01G251600.2	Wheat	cytosol	74.62	73.36
CDY32908	Canola	cytosol	66.02	73.27
CDY54387	Canola	cytosol	68.17	73.21
CDY38255	Canola	cytosol	67.31	72.79
CDX70305	Canola	cytosol	46.24	72.64
CDX94377	Canola	cytosol	71.61	72.39
GSMUA_Achr7P24210_001	Banana	cytosol	74.62	72.29
GSMUA_Achr6P35790_001	Banana	cytosol	72.9	71.52
GSMUA_Achr5P09640_001	Banana	cytosol	71.18	70.28
GSMUA_Achr8P24940_001	Banana	cytosol	73.33	69.17
CDY10056	Canola	cytosol	25.81	68.57
Zm00001d011696_P002	Maize	cytosol	64.95	68.17
CDY69293	Canola	cytosol	48.82	65.23
Zm00001d043693_P002	Maize	cytosol	63.66	63.79
CDY32520	Canola	cytosol	59.57	60.75
CDY66573	Canola	cytosol	56.56	60.74
CDY18127	Canola	cytosol	56.34	60.51
CDY10089	Canola	cytosol	58.49	59.78
CDY13126	Canola	cytosol	59.78	58.16
CDY36972	Canola	cytosol	59.78	58.04
CDY54479	Canola	cytosol	59.35	57.86
CDY12761	Canola	cytosol	55.48	57.85
CDY14235	Canola	cytosol	57.42	57.79
CDX90256	Canola	cytosol	55.91	57.52
CDY12062	Canola	cytosol	55.27	57.49
CDY35198	Canola	cytosol	58.49	57.38
CDY49413	Canola	cytosol	55.7	57.17
CDY38379	Canola	cytosol	58.28	57.17
CDY14873	Canola	cytosol	58.28	57.05
CDX92899	Canola	cytosol	51.61	57.01
CDY56353	Canola	cytosol	58.49	56.9
CDX97446	Canola	cytosol	56.77	56.77
CDY50929	Canola	cytosol	51.4	56.77
CDY51704	Canola	cytosol	58.49	56.55
CDX92883	Canola	cytosol	58.49	56.55
CDY43608	Canola	cytosol	58.28	56.22
CDY06860	Canola	cytosol	50.32	56.12
CDY32954	Canola	cytosol	58.06	56.02
CDY35229	Canola	cytosol	49.89	55.64
CDX89823	Canola	cytosol	55.05	55.17
CDY53188	Canola	cytosol	54.62	54.39
CDY18233	Canola	cytosol	55.05	54.24
CDY69732	Canola	cytosol	54.19	54.19
GSMUA_Achr3P32300_001	Banana	endoplasmic reticulum, plasma membrane	43.44	52.2
CDX82685	Canola	cytosol, nucleus, vacuole	22.8	34.08
CDY11509	Canola	cytosol	29.68	24.42
CDY23629	Canola	cytosol	27.1	24.0
CDX76739	Canola	cytosol	30.97	24.0
CDY21505	Canola	cytosol	31.4	23.74
CDY55141	Canola	cytosol	30.32	22.31
CDX70801	Canola	cytosol	32.26	21.93
CDY51243	Canola	cytosol	32.26	21.93
CDX75726	Canola	mitochondrion	30.54	21.78
CDX82524	Canola	mitochondrion	30.54	21.71
CDX97505	Canola	mitochondrion	30.32	21.59
CDY38493	Canola	cytosol	31.83	21.45
CDY02641	Canola	cytosol	31.61	21.43
CDY25451	Canola	cytosol	31.61	21.3
CDY51730	Canola	cytosol	30.32	20.61
CDY21155	Canola	cytosol	31.18	20.6
CDY42890	Canola	cytosol	30.97	20.57
CDY29971	Canola	cytosol	30.97	20.48
CDY53253	Canola	plastid	31.4	19.16
CDY50866	Canola	cytosol	30.54	17.79
CDX94378	Canola	cytosol	4.3	4.61
CDY69292	Canola	cytosol	4.3	4.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	GO:A0A078E3B8	EnsemblPlants:CDX96430	ProteinID:CDX96430	ProteinID:CDX96430.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00102596001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF298	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002541C4A	:

Description

BnaA07g30410D

Coordinates

chrLK031894:+:807354..811977

Molecular Weight (calculated)

51885.5 Da

IEP (calculated)

10.100

GRAVY (calculated)

-0.577

Length

465 amino acids

Sequence
(BLAST)

001: MEPRVGNKFR LGRKIGSGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKLYKVLQ GGTGVPNVKW YGTEGDYNVL VIDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRIEFVH QKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDSN NQHIPYRENK NLTGTARYAS MNTHLGIEQS RRDDLESLGF
201: VLMYFLKGSL PWQGLKAGNK KQKYERISEK KVSTSIESLC RGYPSEFASY FHYCRSLRFD DKPDYAYLKR LFRDLFIREG FQFDYVFDWT ILKYQQSQIS
301: TPPPRPHGAG VGPSSGLPPA IASAERPSGG EEVRPSGWLL GNPRRSSGHI FNSGSSAKQK APVSSDPAIS KDVVLSSSSF LRATGSSRRA TVSSSREPAV
401: PGTDSEPSKP QNIEAGSSSN PKIHGGRSSP IVSSDNNKLS SPSRGNTSVM KNYESNLKGI ESLHF

Best Arabidopsis Sequence Match ( AT1G72710.1 )
(BLAST)

001: MEPRVGNKFR LGRKIGGGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKLYKVLQ GGTGVPNVKW YGVEGDYNVL VIDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRIEFVH QKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDSN HQHIPYRENK NLTGTARYAS MNTHLGIEQS RRDDLESLGF
201: VLMYFLKGSL PWQGLKAGNK KQKYEKISEK KVSTSIEALC RGYPSEFASY FHYCRSLRFD DKPDYAYLKR LFRDLFIREG FQFDYVFDWT ILKYQQSQIS
301: TPPPRHHGPV VGPSSALPPA ITSAERPSGG DEARPSGWSS GIPRRNSGQI FNSGSLAKQK APVSSDPAIS KDVVLSSSSF LRATGSSRRA AVSSSREAAV
401: LGTDSEPSNP QIVEAGSGSN SKIPVSRNSP IVSSEINKLS SPSRATTSVM KNYEANLKGI ESLHF

Arabidopsis Description

CKL2Casein kinase 1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.