Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023732.1-P | Field mustard | cytosol | 99.77 | 99.77 |
| CDY66573 | Canola | cytosol | 98.61 | 98.61 |
| AT3G23340.1 | Thale cress | cytosol | 89.38 | 87.56 |
| CDY10056 | Canola | cytosol | 33.72 | 83.43 |
| VIT_05s0049g01240.t01 | Wine grape | cytosol | 82.22 | 76.72 |
| KRH34398 | Soybean | nucleus | 79.21 | 75.89 |
| CDY12761 | Canola | cytosol | 77.6 | 75.34 |
| KRG92405 | Soybean | cytosol | 78.98 | 75.0 |
| CDY12062 | Canola | cytosol | 77.37 | 74.94 |
| Solyc06g053560.2.1 | Tomato | cytosol | 76.44 | 74.89 |
| CDX90256 | Canola | cytosol | 77.6 | 74.34 |
| CDY49413 | Canola | cytosol | 77.14 | 73.73 |
| Solyc09g090250.2.1 | Tomato | nucleus | 77.83 | 72.63 |
| CDY32954 | Canola | cytosol | 77.6 | 69.71 |
| CDY43608 | Canola | cytosol | 77.6 | 69.71 |
| CDY14873 | Canola | cytosol | 76.21 | 69.47 |
| CDY56353 | Canola | cytosol | 76.67 | 69.46 |
| CDX89823 | Canola | cytosol | 73.9 | 68.97 |
| CDY53188 | Canola | cytosol | 73.67 | 68.31 |
| CDY18233 | Canola | cytosol | 74.13 | 68.01 |
| CDY32520 | Canola | cytosol | 71.59 | 67.98 |
| CDY69732 | Canola | cytosol | 72.75 | 67.74 |
| CDY10089 | Canola | cytosol | 71.13 | 67.69 |
| CDY14235 | Canola | cytosol | 72.06 | 67.53 |
| CDY35198 | Canola | cytosol | 73.9 | 67.51 |
| CDY38379 | Canola | cytosol | 73.67 | 67.3 |
| CDX97446 | Canola | cytosol | 71.82 | 66.88 |
| CDY51704 | Canola | cytosol | 74.13 | 66.74 |
| CDX92883 | Canola | cytosol | 74.13 | 66.74 |
| CDX70305 | Canola | cytosol | 45.5 | 66.55 |
| CDY54479 | Canola | cytosol | 72.75 | 66.04 |
| CDY13126 | Canola | cytosol | 72.06 | 65.27 |
| CDY36972 | Canola | cytosol | 71.82 | 64.93 |
| CDY20695 | Canola | cytosol | 56.81 | 58.85 |
| CDY32908 | Canola | cytosol | 56.81 | 58.71 |
| CDX88601 | Canola | cytosol | 57.74 | 58.14 |
| CDY38255 | Canola | cytosol | 57.74 | 58.14 |
| CDY11892 | Canola | cytosol | 57.51 | 57.91 |
| CDY54387 | Canola | cytosol | 57.51 | 57.51 |
| CDY49859 | Canola | cytosol | 60.97 | 56.77 |
| CDX96430 | Canola | cytosol | 60.51 | 56.34 |
| CDX94377 | Canola | cytosol | 59.82 | 56.3 |
| CDY53866 | Canola | cytosol | 57.51 | 55.83 |
| CDX72938 | Canola | cytosol | 60.28 | 55.18 |
| CDX92899 | Canola | cytosol | 53.58 | 55.11 |
| CDY06860 | Canola | cytosol | 52.89 | 54.92 |
| CDY50929 | Canola | cytosol | 53.12 | 54.63 |
| CDY35229 | Canola | cytosol | 51.96 | 53.96 |
| CDY69293 | Canola | cytosol | 40.65 | 50.57 |
| CDX82685 | Canola | cytosol, nucleus, vacuole | 21.94 | 30.55 |
| CDY11509 | Canola | cytosol | 31.18 | 23.89 |
| CDX76739 | Canola | cytosol | 32.56 | 23.5 |
| CDY21505 | Canola | cytosol | 33.03 | 23.25 |
| CDY23629 | Canola | cytosol | 27.71 | 22.86 |
| CDY55141 | Canola | cytosol | 31.41 | 21.52 |
| CDY51243 | Canola | cytosol | 33.49 | 21.2 |
| CDX70801 | Canola | cytosol | 33.49 | 21.2 |
| CDY02641 | Canola | cytosol | 33.26 | 20.99 |
| CDX75726 | Canola | mitochondrion | 31.41 | 20.86 |
| CDX97505 | Canola | mitochondrion | 31.41 | 20.83 |
| CDX82524 | Canola | mitochondrion | 31.41 | 20.8 |
| CDY38493 | Canola | cytosol | 32.79 | 20.58 |
| CDY25451 | Canola | cytosol | 32.33 | 20.29 |
| CDY29971 | Canola | cytosol | 32.79 | 20.2 |
| CDY21155 | Canola | cytosol | 32.56 | 20.03 |
| CDY42890 | Canola | cytosol | 32.33 | 20.0 |
| CDY51730 | Canola | cytosol | 31.41 | 19.88 |
| CDY53253 | Canola | plastid | 33.03 | 18.77 |
| CDY50866 | Canola | cytosol | 32.56 | 17.67 |
| CDY69292 | Canola | cytosol | 3.23 | 3.23 |
| CDX94378 | Canola | cytosol | 3.0 | 3.0 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.4.1 | GO:A0A078FZD0 | UniProt:A0A078FZD0 | EnsemblPlants:CDY18127 | ProteinID:CDY18127 |
| ProteinID:CDY18127.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00002644001 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR11909 |
| PANTHER:PTHR11909:SF178 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0004EDEC04 | SEG:seg | : | : | : | : |
Description
BnaA01g23880DBnaA01g23880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZD0]
Coordinates
chrLK032082:-:719651..722814
Molecular Weight (calculated)
49354.1 Da
IEP (calculated)
9.973
GRAVY (calculated)
-0.608
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHVIGGKFK LSRKIGSGSF GEIYIGSNVQ TGEEVAVKLE PVKTKHPQLH YESKVYMLLQ GGSGIPHLKW YGVEGEYNCM AIDLLGPSLE DLFNYCTRSF
101: SLKTVLMLAD QLINRVEYMH IRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYDKISE RKMLTPVELL CKSFPSEFTS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQMGS
301: SSRSKPNPKA ALDTPGPSAE KSEMPSEGKD LRERFSGAVE AFARRNVWSP GIRSSKEVLV SEKTRNESAR AVMSSSRPGS SGELSENRSS KLFSSGTQKI
401: QPGQESKPTA RLGRNDDALR SFDLLTIGSG KRK
101: SLKTVLMLAD QLINRVEYMH IRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYDKISE RKMLTPVELL CKSFPSEFTS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQMGS
301: SSRSKPNPKA ALDTPGPSAE KSEMPSEGKD LRERFSGAVE AFARRNVWSP GIRSSKEVLV SEKTRNESAR AVMSSSRPGS SGELSENRSS KLFSSGTQKI
401: QPGQESKPTA RLGRNDDALR SFDLLTIGSG KRK
001: MDHVIGGKFK LGRKIGSGSF GELYIGINVQ TGEEVALKLE PVKTKHPQLH YESKVYMLLQ GGTGVPHIKW FGVEGNYNCM AIDLLGPSLE DLFNYCTRSF
101: SLKTVLMLAD QLINRVEYMH SRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFIRGS LPWQGLKAGT KKQKYEKISE KKMLTPVEVL CKSYPSEFTS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQSGS
301: ISKPRPNPKP ALDPPGPSAE RNEKPIVGQD LRERFSGAVE AFARRNVPSH GIRPKHIFSD DASKEVQVSE KTRNEIATKM AVMSSSQPGS SGELSENRSS
401: KLFSSSAQKI QPVQETKLSA RLGRDDGLRS FDMLTIGSGK RK
101: SLKTVLMLAD QLINRVEYMH SRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFIRGS LPWQGLKAGT KKQKYEKISE KKMLTPVEVL CKSYPSEFTS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQSGS
301: ISKPRPNPKP ALDPPGPSAE RNEKPIVGQD LRERFSGAVE AFARRNVPSH GIRPKHIFSD DASKEVQVSE KTRNEIATKM AVMSSSQPGS SGELSENRSS
401: KLFSSSAQKI QPVQETKLSA RLGRDDGLRS FDMLTIGSGK RK
Arabidopsis Description
CKL10Casein kinase 1-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW62]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.