CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23629	Canola	cytosol	79.33	98.67
CDY55141	Canola	cytosol	93.26	96.36
CDX75726	Canola	mitochondrion	94.64	94.79
Bra027409.1-P	Field mustard	cytosol, plastid	99.69	94.48
CDX82524	Canola	mitochondrion	94.49	94.34
CDY51730	Canola	cytosol	97.24	92.84
AT3G13670.1	Thale cress	cytosol	96.48	89.62
GSMUA_Achr11P...	Banana	cytosol	76.88	83.67
Solyc12g100310.1.1	Tomato	nucleus	74.89	81.23
KRH46874	Soybean	nucleus	82.08	79.76
KRH01814	Soybean	nucleus	82.08	79.76
TraesCS5B01G000400.2	Wheat	cytosol	71.67	78.39
TraesCS5D01G000900.1	Wheat	cytosol	71.52	78.22
TraesCS5A01G000600.2	Wheat	cytosol	71.52	78.22
VIT_06s0004g01090.t01	Wine grape	nucleus	84.38	77.17
KRG93028	Soybean	cytosol	78.87	76.98
KRH36274	Soybean	nucleus	79.17	76.93
CDX76739	Canola	cytosol	69.83	76.0
Zm00001d041186_P002	Maize	nucleus	69.53	75.79
CDY21505	Canola	cytosol	71.36	75.77
CDY11509	Canola	cytosol	65.39	75.58
HORVU5Hr1G000060.5	Barley	cytosol	68.76	75.46
OQU79738	Sorghum	nucleus	70.9	75.04
Solyc01g006120.2.1	Tomato	nucleus	78.25	74.93
GSMUA_Achr8P16690_001	Banana	endoplasmic reticulum, plasma membrane	76.57	74.4
GSMUA_Achr6P11480_001	Banana	plastid	79.33	73.79
PGSC0003DMT400081865	Potato	cytosol	67.99	72.31
CDY51243	Canola	cytosol	71.36	68.13
CDX70801	Canola	cytosol	71.06	67.84
CDY02641	Canola	cytosol	71.06	67.64
CDY38493	Canola	cytosol	71.06	67.25
CDY25451	Canola	cytosol	70.9	67.1
CDY42890	Canola	cytosol	71.52	66.71
CDY29971	Canola	cytosol	71.52	66.43
CDY21155	Canola	cytosol	71.52	66.34
CDY53253	Canola	plastid	70.6	60.5
CDY50866	Canola	cytosol	71.21	58.27
CDY10056	Canola	cytosol	9.8	36.57
CDX70305	Canola	cytosol	15.77	34.8
CDY35198	Canola	cytosol	23.43	32.28
CDY38379	Canola	cytosol	23.43	32.28
CDY66573	Canola	cytosol	21.13	31.87
CDX92883	Canola	cytosol	23.43	31.81
CDY51704	Canola	cytosol	23.28	31.6
CDY18127	Canola	cytosol	20.83	31.41
CDY14235	Canola	cytosol	22.05	31.17
CDY12062	Canola	cytosol	21.29	31.1
CDY12761	Canola	cytosol	21.13	30.94
CDY35229	Canola	cytosol	19.75	30.94
CDX92899	Canola	cytosol	19.91	30.88
CDY10089	Canola	cytosol	21.44	30.77
CDX97446	Canola	cytosol	21.9	30.75
CDX90256	Canola	cytosol	21.29	30.75
CDY32520	Canola	cytosol	21.44	30.7
CDY50929	Canola	cytosol	19.75	30.64
CDY49413	Canola	cytosol	21.13	30.46
CDX96430	Canola	cytosol	21.59	30.32
CDY06860	Canola	cytosol	19.3	30.22
CDX89823	Canola	cytosol	21.44	30.17
CDY56353	Canola	cytosol	22.05	30.13
CDY14873	Canola	cytosol	21.9	30.11
CDY18233	Canola	cytosol	21.75	30.08
CDY43608	Canola	cytosol	22.21	30.08
CDX72938	Canola	cytosol	21.75	30.02
CDY32954	Canola	cytosol	22.05	29.88
CDY13126	Canola	cytosol	21.75	29.71
CDY20695	Canola	cytosol	18.99	29.67
CDY32908	Canola	cytosol	18.99	29.59
CDX94377	Canola	cytosol	20.83	29.57
CDY53188	Canola	cytosol	21.13	29.55
CDY38255	Canola	cytosol	19.45	29.53
CDY36972	Canola	cytosol	21.59	29.44
CDY54387	Canola	cytosol	19.45	29.33
CDY11892	Canola	cytosol	19.3	29.3
CDY69732	Canola	cytosol	20.83	29.25
CDX88601	Canola	cytosol	19.14	29.07
CDY49859	Canola	cytosol	20.67	29.03
CDY54479	Canola	cytosol	21.13	28.93
CDY53866	Canola	cytosol	19.14	28.03
CDY69293	Canola	cytosol	14.55	27.3
CDX82685	Canola	cytosol, nucleus, vacuole	7.5	15.76
CDY69292	Canola	cytosol	1.99	3.0
CDX94378	Canola	cytosol	1.68	2.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:12.3.6.2	MapMan:18.4.4.2	GO:A0A078E616	EnsemblPlants:CDX97505	ProteinID:CDX97505
ProteinID:CDX97505.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00104712001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909
PANTHER:PTHR11909:SF207	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EEBD04	SEG:seg	:	:	:	:

Description

BnaA05g25740D

Coordinates

chrLK031900:+:24149..28193

Molecular Weight (calculated)

73238.2 Da

IEP (calculated)

8.987

GRAVY (calculated)

-0.486

Length

653 amino acids

Sequence
(BLAST)

001: MPELRRGVRR GPVAVGVAER PRTRLAARRL KEEDKVVVEE EEEEEEKEVM AIGNDSGGSN KAAAQEEEGN TAPFPERVQV GGSPLYKVER KLGKGGFGQV
101: FVGRRISGGN DRSAGASILE VALKFEHRSS KGCNYGPPHE WQVYNTLGGS HGVPRVHFKG RQGDYYIMVM DILGPSLWDI WNTSGQAMSS EMVACIAVES
201: LSILEKMHAK GYVHGDVKPE NFLLGQPSTS QEKKLFLVDL GLATKWREGG GSGQHVEYDQ RPDMFRGTVR YASAHAHLGR TASRRDDLES LAYTLIFLHR
301: GRLPWQGYQG DNKSFLVCKK KMATSPDMLC CFCPAPFKQF LEIVVNMKFD EEPNYGKLVS LFQELLGENP AIRPINTEGA QKIIFQVGQK RGRLSIGEEE
401: EDAPRKKVRL GVPATQWISI YNARQPMKQR YHYNVADSRL AQHIERGIAD GLLISCVSSC SNLWALIMDA GTGFTNQVYE LSPVFLHKEW IMEQWEKNYY
501: ISSIAGATNG SSLVVMSKGT QYSQQSYKVS DSFPFKWINK KWREGFHVTS MATAGSRWGV VMSRNSGYSE QVVELDFLYP SEGVHRRWDG GYRITSTAAT
601: TDQAALILSI PRRRLADETQ ETLRTSQFPS THVKEKWGKN LYLASLSYGR TVS

Best Arabidopsis Sequence Match ( AT3G13670.1 )
(BLAST)

001: MPELRRGVRR GRVTDAVAPN QLPQTPTEKK PKKSTVKAPK PVAGGVTGVA ERPRTRLAAR KLKEEDKEIP QEIPVVVPSK DSDIDKNKGK EVVVEEEKKD
101: MAIGNDSGGS NKAAAQEEEG NTAPFPERVQ VGGSPLYKVE RKLGKGGFGQ VFVGRRISGG NDRSAGASIL EVALKFEHRS SKGCNYGPPH EWQVYNTLGG
201: SHGVPRVHFK GRQGDYYVMV MDMLGPSLWD LWNTSGQAMS SEMVACIAVE SLSILEKMHA KGYVHGDVKP ENFLLGQPST SQEKKLFLVD LGLATKWREG
301: GSGQHVEYDQ RPDMFRGTVR YASAHAHLGR TASRRDDLES LAYTLIFLHR GRLPWQGYQG DNKSFLVCKK KMATSPDMLC CFCPPPFKQF LEIVVNMKFD
401: EEPNYGKLVS LFQDLLGENP AIRPINTEGA QKIIFQVGQK RGRLSIGEEE EDAPRKKVRL GVPATQWISI YNARQPMKQR YHYNVADIRL AQHIERGIAD
501: GLLISCVSSC SNLWALIMDA GTGFTHQVYE LSPVFLHKEW IMEQWEKNYY ISSIAGASNG SSLVVMSKGT QYTQQSYKVS DSFPFKWINK KWREGFHVTS
601: MATAGNRWGV VMSRNSGYSE QVVELDFLYP SEGIHRRWDG GFRITSTAAT TDQAALILSI PRRRLVDETQ ETLRTSQFPS THVKEKWGKN LYLASLSYGR
701: TVS

Arabidopsis Description

Casein kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LID3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.