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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92883 Canola cytosol 99.17 99.17
Bra024191.1-P Field mustard cytosol 61.95 98.35
CDY35198 Canola cytosol 94.59 95.99
CDY38379 Canola cytosol 93.97 95.36
CDX97446 Canola cytosol 91.27 94.41
CDY14235 Canola cytosol 90.44 94.16
AT4G28540.1 Thale cress cytosol 92.52 92.9
CDY10056 Canola cytosol 28.9 79.43
KRH19588 Soybean cytosol, nucleus 72.77 77.26
KRG95693 Soybean cytosol 74.84 77.09
KRH32213 Soybean cytosol 72.35 76.99
KRH67417 Soybean nucleus 74.43 76.5
CDY32520 Canola cytosol 71.31 75.22
CDY66573 Canola cytosol 66.94 74.36
CDY10089 Canola cytosol 70.27 74.29
CDY54479 Canola cytosol 73.6 74.21
CDY18127 Canola cytosol 66.74 74.13
CDY36972 Canola cytosol 73.39 73.7
CDY13126 Canola cytosol 73.18 73.64
CDY12761 Canola cytosol 65.9 71.08
CDY12062 Canola cytosol 65.28 70.25
CDY49413 Canola cytosol 66.11 70.2
CDX90256 Canola cytosol 65.07 69.25
CDY56353 Canola cytosol 67.36 67.78
CDY14873 Canola cytosol 66.74 67.58
CDX89823 Canola cytosol 64.66 67.03
CDY32954 Canola cytosol 66.74 66.6
CDY43608 Canola cytosol 66.53 66.39
CDY18233 Canola cytosol 65.07 66.31
CDY53188 Canola cytosol 64.24 66.17
CDY69732 Canola cytosol 63.2 65.38
CDX70305 Canola cytosol 40.12 65.2
CDX88601 Canola cytosol 55.51 62.09
CDY20695 Canola cytosol 53.85 61.96
CDY11892 Canola cytosol 55.3 61.86
CDY38255 Canola cytosol 55.3 61.86
CDY32908 Canola cytosol 53.64 61.58
CDY54387 Canola cytosol 55.3 61.43
CDY49859 Canola cytosol 57.17 59.14
CDX94377 Canola cytosol 56.13 58.7
CDY53866 Canola cytosol 54.26 58.52
CDX96430 Canola cytosol 56.55 58.49
CDX72938 Canola cytosol 56.34 57.29
CDX92899 Canola cytosol 49.48 56.53
KRH66363 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 29.94 56.47
CDY06860 Canola cytosol 48.44 55.88
CDY50929 Canola cytosol 48.86 55.82
CDY35229 Canola cytosol 48.23 55.64
CDY69293 Canola cytosol 39.5 54.6
CDX82685 Canola cytosol, nucleus, vacuole 20.79 32.15
CDY11509 Canola cytosol 30.98 26.37
CDX76739 Canola cytosol 32.64 26.17
CDY23629 Canola cytosol 27.86 25.52
CDY21505 Canola cytosol 32.22 25.2
CDY55141 Canola cytosol 31.6 24.05
CDX75726 Canola mitochondrion 31.6 23.31
CDX97505 Canola mitochondrion 31.6 23.28
CDX82524 Canola mitochondrion 31.6 23.24
CDY51243 Canola cytosol 32.02 22.51
CDX70801 Canola cytosol 32.02 22.51
CDY02641 Canola cytosol 31.81 22.3
CDY51730 Canola cytosol 31.6 22.22
CDY25451 Canola cytosol 31.81 22.17
CDY38493 Canola cytosol 31.81 22.17
CDY29971 Canola cytosol 31.6 21.62
CDY21155 Canola cytosol 31.39 21.45
CDY42890 Canola cytosol 31.18 21.43
CDY53253 Canola plastid 31.6 19.95
CDY50866 Canola cytosol 30.98 18.67
CDY69292 Canola cytosol 3.53 3.92
CDX94378 Canola cytosol 3.33 3.69
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.4.1GO:A0A078IQM1UniProt:A0A078IQM1EnsemblPlants:CDY51704ProteinID:CDY51704
ProteinID:CDY51704.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00004050001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR11909
PANTHER:PTHR11909:SF114InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EE778FSEG:seg::::
Description
BnaA03g58940DBnaA03g58940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQM1]
Coordinates
chrLK033020:-:31955..35197
Molecular Weight (calculated)
53835.2 Da
IEP (calculated)
10.485
GRAVY (calculated)
-0.581
Length
481 amino acids
Sequence
(BLAST)
001: MDLKMDNVIG GKFKLGRKIG GGSFGELFLG VSVQTGEEVA VKLEPAKTKH PQLHYESKIY MLLQGGTGIP SLKWFGVQGD YNAMVIDLLG PSLEDLFNYC
101: NRKLTLKAVL MLADQLISRV EYMHSRGFLH RDIKPDNFLM GLGRKANQVY VIDFGLAKKY RDLQTHRHIP YRENKNLTGT ARYASVNTHL GVEQSRRDDL
201: ESLGYVLMYF LRGSLPWQGL KAGTKKQKYD RISEKKVSTP IEVLCKSYPQ EFVSYFQYCR SLRFEDKPDY SYLKRLFRDL FIREGYQFDY VFDWTALKHP
301: QSSSSSRSSS HGRHRTGKPV VAAGPSAEKP ERISVGREIR DRFSGAVEAF ARRNATGAAP HQNQTKHRTL EDVPPPMKPA VNMVSEKGRN TSRYGSASRR
401: AVASGSRPSS SGEQGDSRGS SRVASSGGGV RPSVFQRAQA AAGVSGYESK TASAFNRNRV AASRTARDDA LRSFELLSIR K
Best Arabidopsis Sequence Match ( AT4G28540.1 )
(BLAST)
001: MDLKMDNVIG GKFKLGRKIG GGSFGELFLA VSLQTGEEAA VKLEPAKTKH PQLHYESKIY MLLQGGSGIP SLKWFGVQGD YNAMVIDLLG PSLEDLFNYC
101: NRRLTLKAVL MLADQLISRV EYMHSRGFLH RDIKPDNFLM GLGRKANQVY IIDFGLAKKY RDLQTHRHIP YRENKNLTGT ARYASVNTHL GVEQSRRDDL
201: ESLGYVLMYF LRGSLPWQGL KAGTKKQKYD RISEKKVSTP IEVLCKSYPP EFVSYFQYCR SLRFEDKPDY SYLKRLFRDL FIREGYQFDY VFDWTALKHP
301: QSSARSHSST HERHRTGKPG MGAGPSAEKP ERISVGNIRD KFSGAVEAFA RRNVRGPSPH QNHTRHRTLD EIPSMKPAVN MVSEKGRNTS RYGSASRRAV
401: ASGSRPSSSG EQRESRDSSR VASSGGGVRP SVFQRTQAAA AVSGYESKTA SAFNRDRVAA SRTARDEALR SFELLSIRK
Arabidopsis Description
CKL6Casein kinase 1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.