Factsheet for AT4G28540.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51704	Canola	cytosol	92.9	92.52
CDX92883	Canola	cytosol	92.9	92.52
CDX97446	Canola	cytosol	89.35	92.04
CDY14235	Canola	cytosol	88.31	91.56
Bra011038.1-P	Field mustard	cytosol	91.65	91.27
Bra010361.1-P	Field mustard	cytosol	91.02	91.21
CDY38379	Canola	cytosol	90.19	91.14
CDY35198	Canola	cytosol	90.19	91.14
Bra024191.1-P	Field mustard	cytosol	55.95	88.45
KRG95693	Soybean	cytosol	73.9	75.8
KRH67417	Soybean	nucleus	73.49	75.21
KRH32213	Soybean	cytosol	70.77	75.0
KRH19588	Soybean	cytosol, nucleus	70.56	74.61
AT5G44100.1	Thale cress	cytosol	72.23	72.69
AT3G23340.1	Thale cress	cytosol	66.6	72.17
AT1G03930.1	Thale cress	cytosol	70.77	71.97
AT4G14340.1	Thale cress	cytosol	65.97	69.15
AT5G43320.1	Thale cress	cytosol	68.27	68.12
AT1G04440.1	Thale cress	cytosol	64.72	66.24
AT4G08800.1	Thale cress	cytosol	39.25	65.96
AT4G28880.1	Thale cress	cytosol	50.94	58.8
AT5G57015.1	Thale cress	cytosol	53.03	58.39
AT4G26100.1	Thale cress	cytosol	54.49	58.0
AT4G28860.1	Thale cress	cytosol	49.9	57.73
AT1G72710.1	Thale cress	cytosol	55.11	56.77
AT2G19470.1	Thale cress	cytosol	51.15	56.58
KRH66363	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	29.85	56.08
AT2G25760.2	Thale cress	cytosol	33.19	23.52
AT5G18190.2	Thale cress	cytosol	31.94	22.14
AT3G13670.1	Thale cress	cytosol	32.36	22.05
AT3G03940.1	Thale cress	cytosol, plastid	31.94	21.83
AT3G03930.1	Thale cress	nucleus	10.65	17.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EntrezGene:828972	UniProt:A0A178UYK9	ProteinID:AEE85503.1	ArrayExpress:AT4G28540
EnsemblPlantsGene:AT4G28540	RefSeq:AT4G28540	TAIR:AT4G28540	RefSeq:AT4G28540-TAIR-G	EnsemblPlants:AT4G28540.1	TAIR:AT4G28540.1
EMBL:AY084620	EMBL:AY099715	EMBL:AY943845	EMBL:BT000286	ProteinID:CAA16895.1	ProteinID:CAB81442.1
Symbol:CKL6	GO:GO:0000166	GO:GO:0001558	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0006464
GO:GO:0006468	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0008152	GO:GO:0008360
GO:GO:0009506	GO:GO:0009653	GO:GO:0009987	GO:GO:0012505	GO:GO:0015631	GO:GO:0016020
GO:GO:0016043	GO:GO:0016049	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0030054	GO:GO:0040007	GO:GO:0043622	GO:GO:0046777	GO:GO:0051510
GO:GO:0055028	GO:GO:0071944	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	RefSeq:NP_567812.1	ProteinID:OAO98507.1
PFAM:PF00069	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF114	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
UniProt:Q8LPJ1	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00000AC192	SEG:seg

Description

CKL6Casein kinase 1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ1]

Coordinates

chr4:+:14106735..14110706

Molecular Weight (calculated)

54028.4 Da

IEP (calculated)

10.459

GRAVY (calculated)

-0.622

Length

479 amino acids

Sequence
(BLAST)

001: MDLKMDNVIG GKFKLGRKIG GGSFGELFLA VSLQTGEEAA VKLEPAKTKH PQLHYESKIY MLLQGGSGIP SLKWFGVQGD YNAMVIDLLG PSLEDLFNYC
101: NRRLTLKAVL MLADQLISRV EYMHSRGFLH RDIKPDNFLM GLGRKANQVY IIDFGLAKKY RDLQTHRHIP YRENKNLTGT ARYASVNTHL GVEQSRRDDL
201: ESLGYVLMYF LRGSLPWQGL KAGTKKQKYD RISEKKVSTP IEVLCKSYPP EFVSYFQYCR SLRFEDKPDY SYLKRLFRDL FIREGYQFDY VFDWTALKHP
301: QSSARSHSST HERHRTGKPG MGAGPSAEKP ERISVGNIRD KFSGAVEAFA RRNVRGPSPH QNHTRHRTLD EIPSMKPAVN MVSEKGRNTS RYGSASRRAV
401: ASGSRPSSSG EQRESRDSSR VASSGGGVRP SVFQRTQAAA AVSGYESKTA SAFNRDRVAA SRTARDEALR SFELLSIRK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.