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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14235 Canola cytosol 97.2 97.84
CDY51704 Canola cytosol 94.41 91.27
CDX92883 Canola cytosol 94.41 91.27
CDY35198 Canola cytosol 92.9 91.14
CDY38379 Canola cytosol 92.47 90.72
AT4G28540.1 Thale cress cytosol 92.04 89.35
CDY10056 Canola cytosol 30.11 80.0
KRG95693 Soybean cytosol 74.84 74.52
KRH19588 Soybean cytosol, nucleus 72.26 74.17
KRH67417 Soybean nucleus 74.41 73.93
KRH32213 Soybean cytosol 71.83 73.89
CDY32520 Canola cytosol 71.18 72.59
CDY66573 Canola cytosol 67.1 72.06
CDY10089 Canola cytosol 70.32 71.87
CDY18127 Canola cytosol 66.88 71.82
CDY54479 Canola cytosol 73.33 71.49
CDY13126 Canola cytosol 73.12 71.13
CDY36972 Canola cytosol 72.9 70.77
CDY12761 Canola cytosol 67.74 70.63
CDY12062 Canola cytosol 66.88 69.57
CDY49413 Canola cytosol 67.53 69.32
CDX90256 Canola cytosol 66.45 68.36
CDX89823 Canola cytosol 66.45 66.59
CDY53188 Canola cytosol 66.45 66.17
CDY56353 Canola cytosol 67.96 66.11
CDY14873 Canola cytosol 67.31 65.89
CDY18233 Canola cytosol 66.88 65.89
CDY69732 Canola cytosol 65.59 65.59
CDY32954 Canola cytosol 67.31 64.94
CDY43608 Canola cytosol 66.88 64.52
CDX70305 Canola cytosol 40.43 63.51
CDY20695 Canola cytosol 55.27 61.48
CDX88601 Canola cytosol 56.77 61.4
CDY38255 Canola cytosol 56.77 61.4
CDY11892 Canola cytosol 56.56 61.16
CDY32908 Canola cytosol 55.05 61.1
CDY54387 Canola cytosol 56.77 60.97
CDX94377 Canola cytosol 58.06 58.7
CDY49859 Canola cytosol 57.63 57.63
CDY53866 Canola cytosol 54.62 56.95
CDX96430 Canola cytosol 56.77 56.77
CDX92899 Canola cytosol 50.97 56.29
KRH66363 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 30.75 56.08
CDY50929 Canola cytosol 50.75 56.06
CDY06860 Canola cytosol 50.11 55.88
CDX72938 Canola cytosol 56.77 55.81
CDY35229 Canola cytosol 49.68 55.4
CDY69293 Canola cytosol 40.86 54.6
CDX82685 Canola cytosol, nucleus, vacuole 21.72 32.48
CDY11509 Canola cytosol 30.11 24.78
CDX76739 Canola cytosol 31.83 24.67
CDY23629 Canola cytosol 26.88 23.81
CDY21505 Canola cytosol 31.4 23.74
CDY55141 Canola cytosol 30.97 22.78
CDX75726 Canola mitochondrion 30.97 22.09
CDX82524 Canola mitochondrion 30.97 22.02
CDX97505 Canola mitochondrion 30.75 21.9
CDX70801 Canola cytosol 32.04 21.78
CDY51243 Canola cytosol 32.04 21.78
CDY02641 Canola cytosol 31.83 21.57
CDY38493 Canola cytosol 31.61 21.3
CDY25451 Canola cytosol 31.61 21.3
CDY51730 Canola cytosol 30.97 21.05
CDY29971 Canola cytosol 31.18 20.63
CDY21155 Canola cytosol 30.97 20.45
CDY42890 Canola cytosol 30.75 20.43
CDY53253 Canola plastid 31.61 19.29
CDY50866 Canola cytosol 30.75 17.92
CDY69292 Canola cytosol 3.01 3.23
CDX94378 Canola cytosol 2.8 3.0
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.4.1GO:A0A078E8A6EnsemblPlants:CDX97446ProteinID:CDX97446ProteinID:CDX97446.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00104612001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR11909PANTHER:PTHR11909:SF114
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE7353
SEG:seg:::::
Description
BnaC08g13110D
Coordinates
chrLK031899:+:753477..756738
Molecular Weight (calculated)
52202.2 Da
IEP (calculated)
10.509
GRAVY (calculated)
-0.616
Length
465 amino acids
Sequence
(BLAST)
001: MDLRMDNVIG GKFKLGRKIG GGSFGELFLG VSVQTGEEVA VKLEPAKTKH PQLHYESKIY MLLQGGTGIP SLKWFGVQGD YNAMVIDLLG PSLEDLFNYC
101: NRKLTLKAVL MLADQLISRV EYMHSRGFLH RDIKPDNFLM GLGRKANQVY IIDFGLAKKY RDLQTHRHIP YRENKNLTGT ARYASVNTHL GVEQSRRDDL
201: ESLGYVLMYF LRGSLPWQGL KAGTKKQKYD RISEKKVSTP IEVLCKSYPP EFVSYFQYCR SLRFEDKPDY SYLRRLFRDL FIREGYQFDY VFDWTALKHP
301: QSSSTARSSS HGRHRVSKPG GAARPSAEKP ERVSVGKEIR DRFSGAVEAF ARRNATGASP HENHTRHRTL DDVPSPMKPA LNMVSEKGRN TSRYGSASRR
401: AVASGSRPSS SGDQGESRSS SRVASSGGGG RPSLFQRTQA AAGVSGYESK TASAFNRNRL LSIRK
Best Arabidopsis Sequence Match ( AT1G03930.1 )
(BLAST)
001: MDLVIGGKFK LGRKIGSGSF GELYLGINVQ TGEEVAVKLE SVKTKHPQLH YESKLYMLLQ GGTGVPNLKW YGVEGDYNVM VIDLLGPSLE DLFNYCNRKL
101: SLKTVLMLAD QLINRVEFMH TRGFLHRDIK PDNFLMGLGR KANQVYIIDF GLGKKYRDLQ THRHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLEALG
201: YVLMYFLKGS LPWQGLKAGT KKQKYDRISE KKVATPIEVL CKNQPSEFVS YFRYCRSLRF DDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TVLKYPQIGS
301: SSGSSSRTRN HTTANPGLTA GASLEKQERI AGKETRENRF SGAVEAFSRR HPATSTTRDR SASRNSVDGP LSKHPPGDSE RPRSSSRYGS SSRRAIPSSS
401: RPSSAGGPSD SRSSSRLVTS TGGVGTVSNR ASTSQRIQAG NESRTSSFSR AARNTREDPL RRSLELLTLR K
Arabidopsis Description
CKL9Casein kinase 1-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWB3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.