Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12761 | Canola | cytosol | 94.7 | 96.19 |
| AT4G14340.1 | Thale cress | cytosol | 88.96 | 88.18 |
| CDY12062 | Canola | cytosol | 84.99 | 86.13 |
| CDX90256 | Canola | cytosol | 84.99 | 85.18 |
| CDY10056 | Canola | cytosol | 30.46 | 78.86 |
| CDY66573 | Canola | cytosol | 73.95 | 77.37 |
| CDY18127 | Canola | cytosol | 73.73 | 77.14 |
| VIT_05s0049g01240.t01 | Wine grape | cytosol | 78.59 | 76.72 |
| KRH34398 | Soybean | nucleus | 74.61 | 74.78 |
| Solyc06g053560.2.1 | Tomato | cytosol | 72.19 | 73.98 |
| KRG92405 | Soybean | cytosol | 74.39 | 73.9 |
| Solyc09g090250.2.1 | Tomato | nucleus | 73.73 | 71.98 |
| CDY14235 | Canola | cytosol | 69.54 | 68.18 |
| CDX97446 | Canola | cytosol | 69.32 | 67.53 |
| CDY14873 | Canola | cytosol | 70.64 | 67.37 |
| CDY35198 | Canola | cytosol | 70.42 | 67.3 |
| CDY56353 | Canola | cytosol | 70.86 | 67.15 |
| CDY32520 | Canola | cytosol | 67.11 | 66.67 |
| CDY38379 | Canola | cytosol | 69.76 | 66.67 |
| CDY54479 | Canola | cytosol | 69.98 | 66.46 |
| CDY32954 | Canola | cytosol | 70.64 | 66.39 |
| CDY43608 | Canola | cytosol | 70.64 | 66.39 |
| CDY10089 | Canola | cytosol | 66.67 | 66.37 |
| CDX92883 | Canola | cytosol | 70.42 | 66.32 |
| CDY13126 | Canola | cytosol | 69.98 | 66.32 |
| CDY36972 | Canola | cytosol | 69.98 | 66.18 |
| CDY53188 | Canola | cytosol | 68.21 | 66.17 |
| CDY51704 | Canola | cytosol | 70.2 | 66.11 |
| CDX89823 | Canola | cytosol | 67.55 | 65.95 |
| CDY69732 | Canola | cytosol | 67.33 | 65.59 |
| CDY18233 | Canola | cytosol | 67.77 | 65.04 |
| CDX70305 | Canola | cytosol | 41.28 | 63.18 |
| CDY20695 | Canola | cytosol | 54.75 | 59.33 |
| CDY32908 | Canola | cytosol | 54.53 | 58.95 |
| CDX88601 | Canola | cytosol | 55.85 | 58.84 |
| CDY38255 | Canola | cytosol | 55.63 | 58.6 |
| CDY11892 | Canola | cytosol | 55.63 | 58.6 |
| CDY54387 | Canola | cytosol | 55.85 | 58.43 |
| CDX94377 | Canola | cytosol | 57.62 | 56.74 |
| CDY49859 | Canola | cytosol | 57.62 | 56.13 |
| CDX96430 | Canola | cytosol | 57.17 | 55.7 |
| CDY53866 | Canola | cytosol | 54.53 | 55.38 |
| CDX72938 | Canola | cytosol | 56.95 | 54.55 |
| CDY06860 | Canola | cytosol | 49.23 | 53.48 |
| CDX92899 | Canola | cytosol | 49.67 | 53.44 |
| CDY50929 | Canola | cytosol | 49.67 | 53.44 |
| CDY35229 | Canola | cytosol | 48.34 | 52.52 |
| CDY69293 | Canola | cytosol | 38.85 | 50.57 |
| CDX82685 | Canola | cytosol, nucleus, vacuole | 21.63 | 31.51 |
| CDX76739 | Canola | cytosol | 32.23 | 24.33 |
| CDY11509 | Canola | cytosol | 30.24 | 24.25 |
| CDY21505 | Canola | cytosol | 32.23 | 23.74 |
| CDY23629 | Canola | cytosol | 26.49 | 22.86 |
| CDY55141 | Canola | cytosol | 30.46 | 21.84 |
| CDX75726 | Canola | mitochondrion | 30.46 | 21.17 |
| CDX97505 | Canola | mitochondrion | 30.46 | 21.13 |
| CDX82524 | Canola | mitochondrion | 30.46 | 21.1 |
| CDX70801 | Canola | cytosol | 31.57 | 20.91 |
| CDY51243 | Canola | cytosol | 31.57 | 20.91 |
| CDY02641 | Canola | cytosol | 31.13 | 20.55 |
| CDY38493 | Canola | cytosol | 31.13 | 20.43 |
| CDY25451 | Canola | cytosol | 30.91 | 20.29 |
| CDY51730 | Canola | cytosol | 30.46 | 20.18 |
| CDY29971 | Canola | cytosol | 30.68 | 19.77 |
| CDY21155 | Canola | cytosol | 30.46 | 19.6 |
| CDY42890 | Canola | cytosol | 30.24 | 19.57 |
| CDY53253 | Canola | plastid | 30.91 | 18.37 |
| CDY50866 | Canola | cytosol | 30.02 | 17.04 |
| CDY69292 | Canola | cytosol | 2.65 | 2.76 |
| CDX94378 | Canola | cytosol | 2.21 | 2.3 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.4.1 | GO:A0A078IK28 | UniProt:A0A078IK28 | EnsemblPlants:CDY49413 | ProteinID:CDY49413 |
| ProteinID:CDY49413.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00092985001 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR11909 |
| PANTHER:PTHR11909:SF178 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0004EF43F5 | SEG:seg | : | : | : | : |
Description
BnaCnng17230DBnaCnng17230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK28]
Coordinates
chrLK032831:-:53541..56913
Molecular Weight (calculated)
51697.5 Da
IEP (calculated)
9.961
GRAVY (calculated)
-0.748
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MERNQKKMDH VIGGKFKLGR KLGSGSFGEL YLGINIQTGE EVAVKLEAVK TRHPQLQYES KIYMHLQGGT GVPHLKWFGV EGDYSCMVID LLGPSLEDLF
101: NYCTRKFTLK SVLMLADQLI CRVEYTHSRG FLHRDIKPDN FLMGLGRKAN QVYIIDYGLA KKYKDFQTQK HIPYRENKNL TGTARYASVN THLGIEQSRR
201: DDLESLGYVL MYFLRGSLPW QGLKGGTKKQ KYDKISEKKM LTPVEILCKS HPSEFTSYFH YCRSLRFEDK PDYSYLRRLF RDLFIREGYQ LDYVFDWTTL
301: KYPQTGSTSR PRLTPRPALD PDPPGPPAEK SEKTTVGQDL RGRFSGAIEA FTRRNVSSQG AHGDRSRQRS SDDVPSSSKE VHESDRNHSS KRGVMSPGSS
401: AEPSENHSSR LFSSGSRLAT TQPNYESKPS SGRPGHDYVI RSFELLTIAK NRK
101: NYCTRKFTLK SVLMLADQLI CRVEYTHSRG FLHRDIKPDN FLMGLGRKAN QVYIIDYGLA KKYKDFQTQK HIPYRENKNL TGTARYASVN THLGIEQSRR
201: DDLESLGYVL MYFLRGSLPW QGLKGGTKKQ KYDKISEKKM LTPVEILCKS HPSEFTSYFH YCRSLRFEDK PDYSYLRRLF RDLFIREGYQ LDYVFDWTTL
301: KYPQTGSTSR PRLTPRPALD PDPPGPPAEK SEKTTVGQDL RGRFSGAIEA FTRRNVSSQG AHGDRSRQRS SDDVPSSSKE VHESDRNHSS KRGVMSPGSS
401: AEPSENHSSR LFSSGSRLAT TQPNYESKPS SGRPGHDYVI RSFELLTIAK NRK
001: MDRNQKMDHV IGGKFKLGRK LGSGSFGELY LGINIQTGEE VAVKLEPVKT RHPQLQYESK IYMFLQGGTG VPHLKWFGVE GEYSCMVIDL LGPSLEDLFN
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK
Arabidopsis Description
CKL11Casein kinase 1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q39050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.